Gene : Medtr3g083300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22891:SF35 - PROTEIN ARGONAUTE 6 Description:  eukaryotic translation initiation factor 2c, putative
Genomic Order:  4302 Name:  ? Medtr3g083300
Secondary Identifier:  ? PAC:31055216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g083300 0.5kb upstream 0.5kb upstream 9711 true chr3: 37589775-37599485 Medicago truncatula
Medtr3g083300 0.5kb upstream 0.5kb upstream 500 false chr3: 37598986-37599485 Medicago truncatula
Medtr3g083300 0.5kb downstream 0.5kb downstream 9711 true chr3: 37589275-37598985 Medicago truncatula
Medtr3g083300 0.5kb downstream 0.5kb downstream 500 false chr3: 37589275-37589774 Medicago truncatula
Medtr3g083300 1.0kb upstream 1.0kb upstream 10211 true chr3: 37589775-37599985 Medicago truncatula
Medtr3g083300 1.0kb upstream 1.0kb upstream 1000 false chr3: 37598986-37599985 Medicago truncatula
Medtr3g083300 1.0kb downstream 1.0kb downstream 10211 true chr3: 37588775-37598985 Medicago truncatula
Medtr3g083300 1.0kb downstream 1.0kb downstream 1000 false chr3: 37588775-37589774 Medicago truncatula
Medtr3g083300 2.0kb upstream 2.0kb upstream 11211 true chr3: 37589775-37600985 Medicago truncatula
Medtr3g083300 2.0kb upstream 2.0kb upstream 2000 false chr3: 37598986-37600985 Medicago truncatula
Medtr3g083300 2.0kb downstream 2.0kb downstream 11211 true chr3: 37587775-37598985 Medicago truncatula
Medtr3g083300 2.0kb downstream 2.0kb downstream 2000 false chr3: 37587775-37589774 Medicago truncatula
Medtr3g083300 5.0kb upstream 5.0kb upstream 14211 true chr3: 37589775-37603985 Medicago truncatula
Medtr3g083300 5.0kb upstream 5.0kb upstream 5000 false chr3: 37598986-37603985 Medicago truncatula
Medtr3g083300 5.0kb downstream 5.0kb downstream 14211 true chr3: 37584775-37598985 Medicago truncatula
Medtr3g083300 5.0kb downstream 5.0kb downstream 5000 false chr3: 37584775-37589774 Medicago truncatula
Medtr3g083300 10.0kb upstream 10.0kb upstream 19211 true chr3: 37589775-37608985 Medicago truncatula
Medtr3g083300 10.0kb upstream 10.0kb upstream 10000 false chr3: 37598986-37608985 Medicago truncatula
Medtr3g083300 10.0kb downstream 10.0kb downstream 19211 true chr3: 37579775-37598985 Medicago truncatula
Medtr3g083300 10.0kb downstream 10.0kb downstream 10000 false chr3: 37579775-37589774 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027856 5273 Angiosperm View MSA
122306368 5265 Fabidae View MSA
124061938 5270 Rosid View MSA
123749458 5271 Pentapetalae View MSA
122795022 5272 Eudicot View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.324       High
cufflinks 0.186        
cufflinks 0.164        
cufflinks 0.085       Low
cufflinks 0.372       High
cufflinks 0.084     Low Low
cufflinks 0.228        
cufflinks 0.169        
cufflinks 0.25        

0 Strain