Gene : Medtr3g072710 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31636:SF25 - SCARECROW-LIKE PROTEIN 26 Description:  GRAS family transcription factor
Genomic Order:  3628 Name:  ? Medtr3g072710
Secondary Identifier:  ? PAC:31057717
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g072710 0.5kb upstream 0.5kb upstream 2486 true chr3: 32725078-32727563 Medicago truncatula
Medtr3g072710 0.5kb upstream 0.5kb upstream 500 false chr3: 32727064-32727563 Medicago truncatula
Medtr3g072710 0.5kb downstream 0.5kb downstream 2486 true chr3: 32724578-32727063 Medicago truncatula
Medtr3g072710 0.5kb downstream 0.5kb downstream 500 false chr3: 32724578-32725077 Medicago truncatula
Medtr3g072710 1.0kb upstream 1.0kb upstream 2986 true chr3: 32725078-32728063 Medicago truncatula
Medtr3g072710 1.0kb upstream 1.0kb upstream 1000 false chr3: 32727064-32728063 Medicago truncatula
Medtr3g072710 1.0kb downstream 1.0kb downstream 2986 true chr3: 32724078-32727063 Medicago truncatula
Medtr3g072710 1.0kb downstream 1.0kb downstream 1000 false chr3: 32724078-32725077 Medicago truncatula
Medtr3g072710 2.0kb upstream 2.0kb upstream 3986 true chr3: 32725078-32729063 Medicago truncatula
Medtr3g072710 2.0kb upstream 2.0kb upstream 2000 false chr3: 32727064-32729063 Medicago truncatula
Medtr3g072710 2.0kb downstream 2.0kb downstream 3986 true chr3: 32723078-32727063 Medicago truncatula
Medtr3g072710 2.0kb downstream 2.0kb downstream 2000 false chr3: 32723078-32725077 Medicago truncatula
Medtr3g072710 5.0kb upstream 5.0kb upstream 6986 true chr3: 32725078-32732063 Medicago truncatula
Medtr3g072710 5.0kb upstream 5.0kb upstream 5000 false chr3: 32727064-32732063 Medicago truncatula
Medtr3g072710 5.0kb downstream 5.0kb downstream 6986 true chr3: 32720078-32727063 Medicago truncatula
Medtr3g072710 5.0kb downstream 5.0kb downstream 5000 false chr3: 32720078-32725077 Medicago truncatula
Medtr3g072710 10.0kb upstream 10.0kb upstream 11986 true chr3: 32725078-32737063 Medicago truncatula
Medtr3g072710 10.0kb upstream 10.0kb upstream 10000 false chr3: 32727064-32737063 Medicago truncatula
Medtr3g072710 10.0kb downstream 10.0kb downstream 11986 true chr3: 32715078-32727063 Medicago truncatula
Medtr3g072710 10.0kb downstream 10.0kb downstream 10000 false chr3: 32715078-32725077 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305315 5265 Fabidae View MSA
124066104 5270 Rosid View MSA
123741330 5271 Pentapetalae View MSA
122785836 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.954        
cufflinks 0.114        
cufflinks 0.042     Low  
cufflinks 10.081     High  
cufflinks 0.034     Low Low
cufflinks 7.622        
cufflinks 8.984        
cufflinks 0.014     Low Low
cufflinks 17.546     High High

0 Strain