Gene : Medtr3g072600 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Description:  emp24/gp25L/p24 family protein
Genomic Order:  3619 Name:  ? Medtr3g072600
Secondary Identifier:  ? PAC:31059284
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g072600 0.5kb upstream 0.5kb upstream 2616 true chr3: 32662918-32665533 Medicago truncatula
Medtr3g072600 0.5kb upstream 0.5kb upstream 500 false chr3: 32665034-32665533 Medicago truncatula
Medtr3g072600 0.5kb downstream 0.5kb downstream 2616 true chr3: 32662418-32665033 Medicago truncatula
Medtr3g072600 0.5kb downstream 0.5kb downstream 500 false chr3: 32662418-32662917 Medicago truncatula
Medtr3g072600 1.0kb upstream 1.0kb upstream 3116 true chr3: 32662918-32666033 Medicago truncatula
Medtr3g072600 1.0kb upstream 1.0kb upstream 1000 false chr3: 32665034-32666033 Medicago truncatula
Medtr3g072600 1.0kb downstream 1.0kb downstream 3116 true chr3: 32661918-32665033 Medicago truncatula
Medtr3g072600 1.0kb downstream 1.0kb downstream 1000 false chr3: 32661918-32662917 Medicago truncatula
Medtr3g072600 2.0kb upstream 2.0kb upstream 4116 true chr3: 32662918-32667033 Medicago truncatula
Medtr3g072600 2.0kb upstream 2.0kb upstream 2000 false chr3: 32665034-32667033 Medicago truncatula
Medtr3g072600 2.0kb downstream 2.0kb downstream 4116 true chr3: 32660918-32665033 Medicago truncatula
Medtr3g072600 2.0kb downstream 2.0kb downstream 2000 false chr3: 32660918-32662917 Medicago truncatula
Medtr3g072600 5.0kb upstream 5.0kb upstream 7116 true chr3: 32662918-32670033 Medicago truncatula
Medtr3g072600 5.0kb upstream 5.0kb upstream 5000 false chr3: 32665034-32670033 Medicago truncatula
Medtr3g072600 5.0kb downstream 5.0kb downstream 7116 true chr3: 32657918-32665033 Medicago truncatula
Medtr3g072600 5.0kb downstream 5.0kb downstream 5000 false chr3: 32657918-32662917 Medicago truncatula
Medtr3g072600 10.0kb upstream 10.0kb upstream 12116 true chr3: 32662918-32675033 Medicago truncatula
Medtr3g072600 10.0kb upstream 10.0kb upstream 10000 false chr3: 32665034-32675033 Medicago truncatula
Medtr3g072600 10.0kb downstream 10.0kb downstream 12116 true chr3: 32652918-32665033 Medicago truncatula
Medtr3g072600 10.0kb downstream 10.0kb downstream 10000 false chr3: 32652918-32662917 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297897 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.875     High  
cufflinks 21.534     High  
cufflinks 24.276     High  
cufflinks 29.623     High  
cufflinks 19.08     High  
cufflinks 11.957     High Low
cufflinks 39.03     High High
cufflinks 20.741     High  
cufflinks 26.284     High  

0 Strain