Gene : Medtr3g073010 M. truncatula Mt4.0v1
Defline:  (1 of 1) 6.3.4.11//6.3.4.15 - Biotin--[methylcrotonoyl-CoA-carboxylase] ligase / Biotin--[methylcrotonoyl-CoA-carboxylase] synthetase // Biotin--[acetyl-CoA-carboxylase] ligase / Biotin--protein ligase Description:  biotin holocarboxylase synthetase, putative
Genomic Order:  3651 Name:  ? Medtr3g073010
Secondary Identifier:  ? PAC:31055662
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1264 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g073010 0.5kb upstream 0.5kb upstream 6455 true chr3: 32863494-32869948 Medicago truncatula
Medtr3g073010 0.5kb upstream 0.5kb upstream 500 false chr3: 32863494-32863993 Medicago truncatula
Medtr3g073010 0.5kb downstream 0.5kb downstream 6455 true chr3: 32863994-32870448 Medicago truncatula
Medtr3g073010 0.5kb downstream 0.5kb downstream 500 false chr3: 32869949-32870448 Medicago truncatula
Medtr3g073010 1.0kb upstream 1.0kb upstream 6955 true chr3: 32862994-32869948 Medicago truncatula
Medtr3g073010 1.0kb upstream 1.0kb upstream 1000 false chr3: 32862994-32863993 Medicago truncatula
Medtr3g073010 1.0kb downstream 1.0kb downstream 6955 true chr3: 32863994-32870948 Medicago truncatula
Medtr3g073010 1.0kb downstream 1.0kb downstream 1000 false chr3: 32869949-32870948 Medicago truncatula
Medtr3g073010 2.0kb upstream 2.0kb upstream 7955 true chr3: 32861994-32869948 Medicago truncatula
Medtr3g073010 2.0kb upstream 2.0kb upstream 2000 false chr3: 32861994-32863993 Medicago truncatula
Medtr3g073010 2.0kb downstream 2.0kb downstream 7955 true chr3: 32863994-32871948 Medicago truncatula
Medtr3g073010 2.0kb downstream 2.0kb downstream 2000 false chr3: 32869949-32871948 Medicago truncatula
Medtr3g073010 5.0kb upstream 5.0kb upstream 10955 true chr3: 32858994-32869948 Medicago truncatula
Medtr3g073010 5.0kb upstream 5.0kb upstream 5000 false chr3: 32858994-32863993 Medicago truncatula
Medtr3g073010 5.0kb downstream 5.0kb downstream 10955 true chr3: 32863994-32874948 Medicago truncatula
Medtr3g073010 5.0kb downstream 5.0kb downstream 5000 false chr3: 32869949-32874948 Medicago truncatula
Medtr3g073010 10.0kb upstream 10.0kb upstream 15955 true chr3: 32853994-32869948 Medicago truncatula
Medtr3g073010 10.0kb upstream 10.0kb upstream 10000 false chr3: 32853994-32863993 Medicago truncatula
Medtr3g073010 10.0kb downstream 10.0kb downstream 15955 true chr3: 32863994-32879948 Medicago truncatula
Medtr3g073010 10.0kb downstream 10.0kb downstream 10000 false chr3: 32869949-32879948 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309239 5265 Fabidae View MSA
124067160 5270 Rosid View MSA
123748341 5271 Pentapetalae View MSA
122792571 5272 Eudicot View MSA
122046885 5273 Angiosperm View MSA
121347515 5274 Embryophyte View MSA
123426714 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.961        
cufflinks 0.681        
cufflinks 0.776        
cufflinks 0.23        
cufflinks 0.857        
cufflinks 0.062     Low Low
cufflinks 0.663        
cufflinks 0.727        
cufflinks 0.611        

0 Strain