Gene : Medtr3g073040 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D Description:  OSBP(oxysterol-binding protein)-related protein 1C
Genomic Order:  3653 Name:  ? Medtr3g073040
Secondary Identifier:  ? PAC:31054895
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g073040 0.5kb upstream 0.5kb upstream 7184 true chr3: 32881352-32888535 Medicago truncatula
Medtr3g073040 0.5kb upstream 0.5kb upstream 500 false chr3: 32881352-32881851 Medicago truncatula
Medtr3g073040 0.5kb downstream 0.5kb downstream 7184 true chr3: 32881852-32889035 Medicago truncatula
Medtr3g073040 0.5kb downstream 0.5kb downstream 500 false chr3: 32888536-32889035 Medicago truncatula
Medtr3g073040 1.0kb upstream 1.0kb upstream 7684 true chr3: 32880852-32888535 Medicago truncatula
Medtr3g073040 1.0kb upstream 1.0kb upstream 1000 false chr3: 32880852-32881851 Medicago truncatula
Medtr3g073040 1.0kb downstream 1.0kb downstream 7684 true chr3: 32881852-32889535 Medicago truncatula
Medtr3g073040 1.0kb downstream 1.0kb downstream 1000 false chr3: 32888536-32889535 Medicago truncatula
Medtr3g073040 2.0kb upstream 2.0kb upstream 8684 true chr3: 32879852-32888535 Medicago truncatula
Medtr3g073040 2.0kb upstream 2.0kb upstream 2000 false chr3: 32879852-32881851 Medicago truncatula
Medtr3g073040 2.0kb downstream 2.0kb downstream 8684 true chr3: 32881852-32890535 Medicago truncatula
Medtr3g073040 2.0kb downstream 2.0kb downstream 2000 false chr3: 32888536-32890535 Medicago truncatula
Medtr3g073040 5.0kb upstream 5.0kb upstream 11684 true chr3: 32876852-32888535 Medicago truncatula
Medtr3g073040 5.0kb upstream 5.0kb upstream 5000 false chr3: 32876852-32881851 Medicago truncatula
Medtr3g073040 5.0kb downstream 5.0kb downstream 11684 true chr3: 32881852-32893535 Medicago truncatula
Medtr3g073040 5.0kb downstream 5.0kb downstream 5000 false chr3: 32888536-32893535 Medicago truncatula
Medtr3g073040 10.0kb upstream 10.0kb upstream 16684 true chr3: 32871852-32888535 Medicago truncatula
Medtr3g073040 10.0kb upstream 10.0kb upstream 10000 false chr3: 32871852-32881851 Medicago truncatula
Medtr3g073040 10.0kb downstream 10.0kb downstream 16684 true chr3: 32881852-32898535 Medicago truncatula
Medtr3g073040 10.0kb downstream 10.0kb downstream 10000 false chr3: 32888536-32898535 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122302248 5265 Fabidae View MSA
124062971 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.743        
cufflinks 2.507        
cufflinks 2.928        
cufflinks 2.523        
cufflinks 2.239        
cufflinks 3.38        
cufflinks 6.074       High
cufflinks 2.205       Low
cufflinks 5.893       High

0 Strain