Gene : Medtr3g074180 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Description:  trehalose-6-phosphate phosphatase
Genomic Order:  3727 Name:  ? Medtr3g074180
Secondary Identifier:  ? PAC:31061208
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g074180 0.5kb upstream 0.5kb upstream 3006 true chr3: 33493144-33496149 Medicago truncatula
Medtr3g074180 0.5kb upstream 0.5kb upstream 500 false chr3: 33495650-33496149 Medicago truncatula
Medtr3g074180 0.5kb downstream 0.5kb downstream 3006 true chr3: 33492644-33495649 Medicago truncatula
Medtr3g074180 0.5kb downstream 0.5kb downstream 500 false chr3: 33492644-33493143 Medicago truncatula
Medtr3g074180 1.0kb upstream 1.0kb upstream 3506 true chr3: 33493144-33496649 Medicago truncatula
Medtr3g074180 1.0kb upstream 1.0kb upstream 1000 false chr3: 33495650-33496649 Medicago truncatula
Medtr3g074180 1.0kb downstream 1.0kb downstream 3506 true chr3: 33492144-33495649 Medicago truncatula
Medtr3g074180 1.0kb downstream 1.0kb downstream 1000 false chr3: 33492144-33493143 Medicago truncatula
Medtr3g074180 2.0kb upstream 2.0kb upstream 4506 true chr3: 33493144-33497649 Medicago truncatula
Medtr3g074180 2.0kb upstream 2.0kb upstream 2000 false chr3: 33495650-33497649 Medicago truncatula
Medtr3g074180 2.0kb downstream 2.0kb downstream 4506 true chr3: 33491144-33495649 Medicago truncatula
Medtr3g074180 2.0kb downstream 2.0kb downstream 2000 false chr3: 33491144-33493143 Medicago truncatula
Medtr3g074180 5.0kb upstream 5.0kb upstream 7506 true chr3: 33493144-33500649 Medicago truncatula
Medtr3g074180 5.0kb upstream 5.0kb upstream 5000 false chr3: 33495650-33500649 Medicago truncatula
Medtr3g074180 5.0kb downstream 5.0kb downstream 7506 true chr3: 33488144-33495649 Medicago truncatula
Medtr3g074180 5.0kb downstream 5.0kb downstream 5000 false chr3: 33488144-33493143 Medicago truncatula
Medtr3g074180 10.0kb upstream 10.0kb upstream 12506 true chr3: 33493144-33505649 Medicago truncatula
Medtr3g074180 10.0kb upstream 10.0kb upstream 10000 false chr3: 33495650-33505649 Medicago truncatula
Medtr3g074180 10.0kb downstream 10.0kb downstream 12506 true chr3: 33483144-33495649 Medicago truncatula
Medtr3g074180 10.0kb downstream 10.0kb downstream 10000 false chr3: 33483144-33493143 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310219 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.766        
cufflinks 9.552     High High
cufflinks 4.014        
cufflinks 1.936        
cufflinks 4.012        
cufflinks 0.405       Low
cufflinks 6.243        
cufflinks 6.984        
cufflinks 3.702        

0 Strain