Gene : Medtr3g075090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE Description:  Ulp1 protease family, carboxy-terminal domain protein
Genomic Order:  3812 Name:  ? Medtr3g075090
Secondary Identifier:  ? PAC:31055771
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g075090 0.5kb upstream 0.5kb upstream 2453 true chr3: 34106080-34108532 Medicago truncatula
Medtr3g075090 0.5kb upstream 0.5kb upstream 500 false chr3: 34106080-34106579 Medicago truncatula
Medtr3g075090 0.5kb downstream 0.5kb downstream 2453 true chr3: 34106580-34109032 Medicago truncatula
Medtr3g075090 0.5kb downstream 0.5kb downstream 500 false chr3: 34108533-34109032 Medicago truncatula
Medtr3g075090 1.0kb upstream 1.0kb upstream 2953 true chr3: 34105580-34108532 Medicago truncatula
Medtr3g075090 1.0kb upstream 1.0kb upstream 1000 false chr3: 34105580-34106579 Medicago truncatula
Medtr3g075090 1.0kb downstream 1.0kb downstream 2953 true chr3: 34106580-34109532 Medicago truncatula
Medtr3g075090 1.0kb downstream 1.0kb downstream 1000 false chr3: 34108533-34109532 Medicago truncatula
Medtr3g075090 2.0kb upstream 2.0kb upstream 3953 true chr3: 34104580-34108532 Medicago truncatula
Medtr3g075090 2.0kb upstream 2.0kb upstream 2000 false chr3: 34104580-34106579 Medicago truncatula
Medtr3g075090 2.0kb downstream 2.0kb downstream 3953 true chr3: 34106580-34110532 Medicago truncatula
Medtr3g075090 2.0kb downstream 2.0kb downstream 2000 false chr3: 34108533-34110532 Medicago truncatula
Medtr3g075090 5.0kb upstream 5.0kb upstream 6953 true chr3: 34101580-34108532 Medicago truncatula
Medtr3g075090 5.0kb upstream 5.0kb upstream 5000 false chr3: 34101580-34106579 Medicago truncatula
Medtr3g075090 5.0kb downstream 5.0kb downstream 6953 true chr3: 34106580-34113532 Medicago truncatula
Medtr3g075090 5.0kb downstream 5.0kb downstream 5000 false chr3: 34108533-34113532 Medicago truncatula
Medtr3g075090 10.0kb upstream 10.0kb upstream 11953 true chr3: 34096580-34108532 Medicago truncatula
Medtr3g075090 10.0kb upstream 10.0kb upstream 10000 false chr3: 34096580-34106579 Medicago truncatula
Medtr3g075090 10.0kb downstream 10.0kb downstream 11953 true chr3: 34106580-34118532 Medicago truncatula
Medtr3g075090 10.0kb downstream 10.0kb downstream 10000 false chr3: 34108533-34118532 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311951 5265 Fabidae View MSA
124074830 5270 Rosid View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558        
cufflinks 1.534        
cufflinks 1.653        
cufflinks 0.288       Low
cufflinks 2.723       High
cufflinks 0.25       Low
cufflinks 0.365        
cufflinks 1.582        
cufflinks 0.71        

0 Strain