Gene : Medtr3g075190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12506:SF20 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43 Description:  zinc finger CCCH domain protein
Genomic Order:  3820 Name:  ? Medtr3g075190
Secondary Identifier:  ? PAC:31058159
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g075190 0.5kb upstream 0.5kb upstream 4636 true chr3: 34204008-34208643 Medicago truncatula
Medtr3g075190 0.5kb upstream 0.5kb upstream 500 false chr3: 34208144-34208643 Medicago truncatula
Medtr3g075190 0.5kb downstream 0.5kb downstream 4636 true chr3: 34203508-34208143 Medicago truncatula
Medtr3g075190 0.5kb downstream 0.5kb downstream 500 false chr3: 34203508-34204007 Medicago truncatula
Medtr3g075190 1.0kb upstream 1.0kb upstream 5136 true chr3: 34204008-34209143 Medicago truncatula
Medtr3g075190 1.0kb upstream 1.0kb upstream 1000 false chr3: 34208144-34209143 Medicago truncatula
Medtr3g075190 1.0kb downstream 1.0kb downstream 5136 true chr3: 34203008-34208143 Medicago truncatula
Medtr3g075190 1.0kb downstream 1.0kb downstream 1000 false chr3: 34203008-34204007 Medicago truncatula
Medtr3g075190 2.0kb upstream 2.0kb upstream 6136 true chr3: 34204008-34210143 Medicago truncatula
Medtr3g075190 2.0kb upstream 2.0kb upstream 2000 false chr3: 34208144-34210143 Medicago truncatula
Medtr3g075190 2.0kb downstream 2.0kb downstream 6136 true chr3: 34202008-34208143 Medicago truncatula
Medtr3g075190 2.0kb downstream 2.0kb downstream 2000 false chr3: 34202008-34204007 Medicago truncatula
Medtr3g075190 5.0kb upstream 5.0kb upstream 9136 true chr3: 34204008-34213143 Medicago truncatula
Medtr3g075190 5.0kb upstream 5.0kb upstream 5000 false chr3: 34208144-34213143 Medicago truncatula
Medtr3g075190 5.0kb downstream 5.0kb downstream 9136 true chr3: 34199008-34208143 Medicago truncatula
Medtr3g075190 5.0kb downstream 5.0kb downstream 5000 false chr3: 34199008-34204007 Medicago truncatula
Medtr3g075190 10.0kb upstream 10.0kb upstream 14136 true chr3: 34204008-34218143 Medicago truncatula
Medtr3g075190 10.0kb upstream 10.0kb upstream 10000 false chr3: 34208144-34218143 Medicago truncatula
Medtr3g075190 10.0kb downstream 10.0kb downstream 14136 true chr3: 34194008-34208143 Medicago truncatula
Medtr3g075190 10.0kb downstream 10.0kb downstream 10000 false chr3: 34194008-34204007 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315095 5265 Fabidae View MSA
124063047 5270 Rosid View MSA
123746859 5271 Pentapetalae View MSA
122797489 5272 Eudicot View MSA
122049599 5273 Angiosperm View MSA
121311496 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01       Low
cufflinks 1.653        
cufflinks 1.534        
cufflinks 1.849        
cufflinks 2.477        
cufflinks 0.715       Low
cufflinks 2.823       High
cufflinks 1.293        
cufflinks 3.098       High

0 Strain