Gene : Medtr3g076570 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13317:SF4 - TRANSMEMBRANE ANTERIOR POSTERIOR TRANSFORMATION PROTEIN 1 HOMOLOG Description:  pollen defective IN guidance-like protein
Genomic Order:  3852 Name:  ? Medtr3g076570
Secondary Identifier:  ? PAC:31058041
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g076570 0.5kb upstream 0.5kb upstream 7713 true chr3: 34418207-34425919 Medicago truncatula
Medtr3g076570 0.5kb upstream 0.5kb upstream 500 false chr3: 34425420-34425919 Medicago truncatula
Medtr3g076570 0.5kb downstream 0.5kb downstream 7713 true chr3: 34417707-34425419 Medicago truncatula
Medtr3g076570 0.5kb downstream 0.5kb downstream 500 false chr3: 34417707-34418206 Medicago truncatula
Medtr3g076570 1.0kb upstream 1.0kb upstream 8213 true chr3: 34418207-34426419 Medicago truncatula
Medtr3g076570 1.0kb upstream 1.0kb upstream 1000 false chr3: 34425420-34426419 Medicago truncatula
Medtr3g076570 1.0kb downstream 1.0kb downstream 8213 true chr3: 34417207-34425419 Medicago truncatula
Medtr3g076570 1.0kb downstream 1.0kb downstream 1000 false chr3: 34417207-34418206 Medicago truncatula
Medtr3g076570 2.0kb upstream 2.0kb upstream 9213 true chr3: 34418207-34427419 Medicago truncatula
Medtr3g076570 2.0kb upstream 2.0kb upstream 2000 false chr3: 34425420-34427419 Medicago truncatula
Medtr3g076570 2.0kb downstream 2.0kb downstream 9213 true chr3: 34416207-34425419 Medicago truncatula
Medtr3g076570 2.0kb downstream 2.0kb downstream 2000 false chr3: 34416207-34418206 Medicago truncatula
Medtr3g076570 5.0kb upstream 5.0kb upstream 12213 true chr3: 34418207-34430419 Medicago truncatula
Medtr3g076570 5.0kb upstream 5.0kb upstream 5000 false chr3: 34425420-34430419 Medicago truncatula
Medtr3g076570 5.0kb downstream 5.0kb downstream 12213 true chr3: 34413207-34425419 Medicago truncatula
Medtr3g076570 5.0kb downstream 5.0kb downstream 5000 false chr3: 34413207-34418206 Medicago truncatula
Medtr3g076570 10.0kb upstream 10.0kb upstream 17213 true chr3: 34418207-34435419 Medicago truncatula
Medtr3g076570 10.0kb upstream 10.0kb upstream 10000 false chr3: 34425420-34435419 Medicago truncatula
Medtr3g076570 10.0kb downstream 10.0kb downstream 17213 true chr3: 34408207-34425419 Medicago truncatula
Medtr3g076570 10.0kb downstream 10.0kb downstream 10000 false chr3: 34408207-34418206 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303806 5265 Fabidae View MSA
124068182 5270 Rosid View MSA
123752415 5271 Pentapetalae View MSA
122788398 5272 Eudicot View MSA
122042110 5273 Angiosperm View MSA
121347997 5274 Embryophyte View MSA
123426226 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.345        
cufflinks 0.8       High
cufflinks 0.7        
cufflinks 0.103       Low
cufflinks 0.824       High
cufflinks 0.155       Low
cufflinks 0.207        
cufflinks 0.599        
cufflinks 0.217        

0 Strain