Gene : Medtr3g075500 M. truncatula Mt4.0v1
Defline:  (1 of 20) KOG0131 - Splicing factor 3b, subunit 4 Description:  31 kDa ribonucleoprotein
Genomic Order:  3843 Name:  ? Medtr3g075500
Secondary Identifier:  ? PAC:31060355
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g075500 0.5kb upstream 0.5kb upstream 3038 true chr3: 34378914-34381951 Medicago truncatula
Medtr3g075500 0.5kb upstream 0.5kb upstream 500 false chr3: 34381452-34381951 Medicago truncatula
Medtr3g075500 0.5kb downstream 0.5kb downstream 3038 true chr3: 34378414-34381451 Medicago truncatula
Medtr3g075500 0.5kb downstream 0.5kb downstream 500 false chr3: 34378414-34378913 Medicago truncatula
Medtr3g075500 1.0kb upstream 1.0kb upstream 3538 true chr3: 34378914-34382451 Medicago truncatula
Medtr3g075500 1.0kb upstream 1.0kb upstream 1000 false chr3: 34381452-34382451 Medicago truncatula
Medtr3g075500 1.0kb downstream 1.0kb downstream 3538 true chr3: 34377914-34381451 Medicago truncatula
Medtr3g075500 1.0kb downstream 1.0kb downstream 1000 false chr3: 34377914-34378913 Medicago truncatula
Medtr3g075500 2.0kb upstream 2.0kb upstream 4538 true chr3: 34378914-34383451 Medicago truncatula
Medtr3g075500 2.0kb upstream 2.0kb upstream 2000 false chr3: 34381452-34383451 Medicago truncatula
Medtr3g075500 2.0kb downstream 2.0kb downstream 4538 true chr3: 34376914-34381451 Medicago truncatula
Medtr3g075500 2.0kb downstream 2.0kb downstream 2000 false chr3: 34376914-34378913 Medicago truncatula
Medtr3g075500 5.0kb upstream 5.0kb upstream 7538 true chr3: 34378914-34386451 Medicago truncatula
Medtr3g075500 5.0kb upstream 5.0kb upstream 5000 false chr3: 34381452-34386451 Medicago truncatula
Medtr3g075500 5.0kb downstream 5.0kb downstream 7538 true chr3: 34373914-34381451 Medicago truncatula
Medtr3g075500 5.0kb downstream 5.0kb downstream 5000 false chr3: 34373914-34378913 Medicago truncatula
Medtr3g075500 10.0kb upstream 10.0kb upstream 12538 true chr3: 34378914-34391451 Medicago truncatula
Medtr3g075500 10.0kb upstream 10.0kb upstream 10000 false chr3: 34381452-34391451 Medicago truncatula
Medtr3g075500 10.0kb downstream 10.0kb downstream 12538 true chr3: 34368914-34381451 Medicago truncatula
Medtr3g075500 10.0kb downstream 10.0kb downstream 10000 false chr3: 34368914-34378913 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311662 5265 Fabidae View MSA
124073002 5270 Rosid View MSA
123747230 5271 Pentapetalae View MSA
122795057 5272 Eudicot View MSA
122047062 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.599        
cufflinks 14.949     High  
cufflinks 19.296     High High
cufflinks 5.256        
cufflinks 25.656     High High
cufflinks 3.093       Low
cufflinks 3.017       Low
cufflinks 18.926     High  
cufflinks 6.062        

0 Strain