Gene : Medtr3g077250 M. truncatula Mt4.0v1
Defline:  (1 of 4) 2.6.1.27 - Tryptophan transaminase / Tryptophan aminotransferase Description:  tryptophan aminotransferase-like protein
Genomic Order:  3890 Name:  ? Medtr3g077250
Secondary Identifier:  ? PAC:31061260
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWYDQC-4 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g077250 0.5kb upstream 0.5kb upstream 6541 true chr3: 34685465-34692005 Medicago truncatula
Medtr3g077250 0.5kb upstream 0.5kb upstream 500 false chr3: 34691506-34692005 Medicago truncatula
Medtr3g077250 0.5kb downstream 0.5kb downstream 6541 true chr3: 34684965-34691505 Medicago truncatula
Medtr3g077250 0.5kb downstream 0.5kb downstream 500 false chr3: 34684965-34685464 Medicago truncatula
Medtr3g077250 1.0kb upstream 1.0kb upstream 7041 true chr3: 34685465-34692505 Medicago truncatula
Medtr3g077250 1.0kb upstream 1.0kb upstream 1000 false chr3: 34691506-34692505 Medicago truncatula
Medtr3g077250 1.0kb downstream 1.0kb downstream 7041 true chr3: 34684465-34691505 Medicago truncatula
Medtr3g077250 1.0kb downstream 1.0kb downstream 1000 false chr3: 34684465-34685464 Medicago truncatula
Medtr3g077250 2.0kb upstream 2.0kb upstream 8041 true chr3: 34685465-34693505 Medicago truncatula
Medtr3g077250 2.0kb upstream 2.0kb upstream 2000 false chr3: 34691506-34693505 Medicago truncatula
Medtr3g077250 2.0kb downstream 2.0kb downstream 8041 true chr3: 34683465-34691505 Medicago truncatula
Medtr3g077250 2.0kb downstream 2.0kb downstream 2000 false chr3: 34683465-34685464 Medicago truncatula
Medtr3g077250 5.0kb upstream 5.0kb upstream 11041 true chr3: 34685465-34696505 Medicago truncatula
Medtr3g077250 5.0kb upstream 5.0kb upstream 5000 false chr3: 34691506-34696505 Medicago truncatula
Medtr3g077250 5.0kb downstream 5.0kb downstream 11041 true chr3: 34680465-34691505 Medicago truncatula
Medtr3g077250 5.0kb downstream 5.0kb downstream 5000 false chr3: 34680465-34685464 Medicago truncatula
Medtr3g077250 10.0kb upstream 10.0kb upstream 16041 true chr3: 34685465-34701505 Medicago truncatula
Medtr3g077250 10.0kb upstream 10.0kb upstream 10000 false chr3: 34691506-34701505 Medicago truncatula
Medtr3g077250 10.0kb downstream 10.0kb downstream 16041 true chr3: 34675465-34691505 Medicago truncatula
Medtr3g077250 10.0kb downstream 10.0kb downstream 10000 false chr3: 34675465-34685464 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311428 5265 Fabidae View MSA
124065149 5270 Rosid View MSA
123746345 5271 Pentapetalae View MSA
122790946 5272 Eudicot View MSA
122048062 5273 Angiosperm View MSA
121350160 5274 Embryophyte View MSA
123381598 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low Low
cufflinks 0.267        
cufflinks 0.382        
cufflinks 0.222        
cufflinks 0.555        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.305        
cufflinks 0.22        
cufflinks 0.832       High

0 Strain