Gene : Medtr3g077050 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Description:  60S ribosomal protein L27a-3
Genomic Order:  3880 Name:  ? Medtr3g077050
Secondary Identifier:  ? PAC:31060532
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g077050 0.5kb upstream 0.5kb upstream 1633 true chr3: 34600899-34602531 Medicago truncatula
Medtr3g077050 0.5kb upstream 0.5kb upstream 500 false chr3: 34600899-34601398 Medicago truncatula
Medtr3g077050 0.5kb downstream 0.5kb downstream 1633 true chr3: 34601399-34603031 Medicago truncatula
Medtr3g077050 0.5kb downstream 0.5kb downstream 500 false chr3: 34602532-34603031 Medicago truncatula
Medtr3g077050 1.0kb upstream 1.0kb upstream 2133 true chr3: 34600399-34602531 Medicago truncatula
Medtr3g077050 1.0kb upstream 1.0kb upstream 1000 false chr3: 34600399-34601398 Medicago truncatula
Medtr3g077050 1.0kb downstream 1.0kb downstream 2133 true chr3: 34601399-34603531 Medicago truncatula
Medtr3g077050 1.0kb downstream 1.0kb downstream 1000 false chr3: 34602532-34603531 Medicago truncatula
Medtr3g077050 2.0kb upstream 2.0kb upstream 3133 true chr3: 34599399-34602531 Medicago truncatula
Medtr3g077050 2.0kb upstream 2.0kb upstream 2000 false chr3: 34599399-34601398 Medicago truncatula
Medtr3g077050 2.0kb downstream 2.0kb downstream 3133 true chr3: 34601399-34604531 Medicago truncatula
Medtr3g077050 2.0kb downstream 2.0kb downstream 2000 false chr3: 34602532-34604531 Medicago truncatula
Medtr3g077050 5.0kb upstream 5.0kb upstream 6133 true chr3: 34596399-34602531 Medicago truncatula
Medtr3g077050 5.0kb upstream 5.0kb upstream 5000 false chr3: 34596399-34601398 Medicago truncatula
Medtr3g077050 5.0kb downstream 5.0kb downstream 6133 true chr3: 34601399-34607531 Medicago truncatula
Medtr3g077050 5.0kb downstream 5.0kb downstream 5000 false chr3: 34602532-34607531 Medicago truncatula
Medtr3g077050 10.0kb upstream 10.0kb upstream 11133 true chr3: 34591399-34602531 Medicago truncatula
Medtr3g077050 10.0kb upstream 10.0kb upstream 10000 false chr3: 34591399-34601398 Medicago truncatula
Medtr3g077050 10.0kb downstream 10.0kb downstream 11133 true chr3: 34601399-34612531 Medicago truncatula
Medtr3g077050 10.0kb downstream 10.0kb downstream 10000 false chr3: 34602532-34612531 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313836 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.696     High Low
cufflinks 118.624     High  
cufflinks 160.677     High  
cufflinks 453.256     High High
cufflinks 199.286     High  
cufflinks 277.797     High  
cufflinks 173.21     High  
cufflinks 168.831     High  
cufflinks 281.381     High  

0 Strain