Gene : Medtr3g077240 M. truncatula Mt4.0v1
Defline:  (1 of 61) PF03195 - Protein of unknown function DUF260 (DUF260) Description:  lateral organ boundaries (LOB) domain protein
Genomic Order:  3889 Name:  ? Medtr3g077240
Secondary Identifier:  ? PAC:31059454
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g077240 0.5kb upstream 0.5kb upstream 1093 true chr3: 34674684-34675776 Medicago truncatula
Medtr3g077240 0.5kb upstream 0.5kb upstream 500 false chr3: 34674684-34675183 Medicago truncatula
Medtr3g077240 0.5kb downstream 0.5kb downstream 1093 true chr3: 34675184-34676276 Medicago truncatula
Medtr3g077240 0.5kb downstream 0.5kb downstream 500 false chr3: 34675777-34676276 Medicago truncatula
Medtr3g077240 1.0kb upstream 1.0kb upstream 1593 true chr3: 34674184-34675776 Medicago truncatula
Medtr3g077240 1.0kb upstream 1.0kb upstream 1000 false chr3: 34674184-34675183 Medicago truncatula
Medtr3g077240 1.0kb downstream 1.0kb downstream 1593 true chr3: 34675184-34676776 Medicago truncatula
Medtr3g077240 1.0kb downstream 1.0kb downstream 1000 false chr3: 34675777-34676776 Medicago truncatula
Medtr3g077240 2.0kb upstream 2.0kb upstream 2593 true chr3: 34673184-34675776 Medicago truncatula
Medtr3g077240 2.0kb upstream 2.0kb upstream 2000 false chr3: 34673184-34675183 Medicago truncatula
Medtr3g077240 2.0kb downstream 2.0kb downstream 2593 true chr3: 34675184-34677776 Medicago truncatula
Medtr3g077240 2.0kb downstream 2.0kb downstream 2000 false chr3: 34675777-34677776 Medicago truncatula
Medtr3g077240 5.0kb upstream 5.0kb upstream 5593 true chr3: 34670184-34675776 Medicago truncatula
Medtr3g077240 5.0kb upstream 5.0kb upstream 5000 false chr3: 34670184-34675183 Medicago truncatula
Medtr3g077240 5.0kb downstream 5.0kb downstream 5593 true chr3: 34675184-34680776 Medicago truncatula
Medtr3g077240 5.0kb downstream 5.0kb downstream 5000 false chr3: 34675777-34680776 Medicago truncatula
Medtr3g077240 10.0kb upstream 10.0kb upstream 10593 true chr3: 34665184-34675776 Medicago truncatula
Medtr3g077240 10.0kb upstream 10.0kb upstream 10000 false chr3: 34665184-34675183 Medicago truncatula
Medtr3g077240 10.0kb downstream 10.0kb downstream 10593 true chr3: 34675184-34685776 Medicago truncatula
Medtr3g077240 10.0kb downstream 10.0kb downstream 10000 false chr3: 34675777-34685776 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313203 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.164       Low
cufflinks 1.226        
cufflinks 1.281        
cufflinks 0.516        
cufflinks 1.715       High
cufflinks 0.721        
cufflinks 0.528        
cufflinks 1.204        
cufflinks 0.387        

0 Strain