Gene : Medtr3g077720 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Description:  iron-sulfur cluster assembly protein IscU
Genomic Order:  3922 Name:  ? Medtr3g077720
Secondary Identifier:  ? PAC:31057210
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g077720 0.5kb upstream 0.5kb upstream 2523 true chr3: 34952462-34954984 Medicago truncatula
Medtr3g077720 0.5kb upstream 0.5kb upstream 500 false chr3: 34952462-34952961 Medicago truncatula
Medtr3g077720 0.5kb downstream 0.5kb downstream 2523 true chr3: 34952962-34955484 Medicago truncatula
Medtr3g077720 0.5kb downstream 0.5kb downstream 500 false chr3: 34954985-34955484 Medicago truncatula
Medtr3g077720 1.0kb upstream 1.0kb upstream 3023 true chr3: 34951962-34954984 Medicago truncatula
Medtr3g077720 1.0kb upstream 1.0kb upstream 1000 false chr3: 34951962-34952961 Medicago truncatula
Medtr3g077720 1.0kb downstream 1.0kb downstream 3023 true chr3: 34952962-34955984 Medicago truncatula
Medtr3g077720 1.0kb downstream 1.0kb downstream 1000 false chr3: 34954985-34955984 Medicago truncatula
Medtr3g077720 2.0kb upstream 2.0kb upstream 4023 true chr3: 34950962-34954984 Medicago truncatula
Medtr3g077720 2.0kb upstream 2.0kb upstream 2000 false chr3: 34950962-34952961 Medicago truncatula
Medtr3g077720 2.0kb downstream 2.0kb downstream 4023 true chr3: 34952962-34956984 Medicago truncatula
Medtr3g077720 2.0kb downstream 2.0kb downstream 2000 false chr3: 34954985-34956984 Medicago truncatula
Medtr3g077720 5.0kb upstream 5.0kb upstream 7023 true chr3: 34947962-34954984 Medicago truncatula
Medtr3g077720 5.0kb upstream 5.0kb upstream 5000 false chr3: 34947962-34952961 Medicago truncatula
Medtr3g077720 5.0kb downstream 5.0kb downstream 7023 true chr3: 34952962-34959984 Medicago truncatula
Medtr3g077720 5.0kb downstream 5.0kb downstream 5000 false chr3: 34954985-34959984 Medicago truncatula
Medtr3g077720 10.0kb upstream 10.0kb upstream 12023 true chr3: 34942962-34954984 Medicago truncatula
Medtr3g077720 10.0kb upstream 10.0kb upstream 10000 false chr3: 34942962-34952961 Medicago truncatula
Medtr3g077720 10.0kb downstream 10.0kb downstream 12023 true chr3: 34952962-34964984 Medicago truncatula
Medtr3g077720 10.0kb downstream 10.0kb downstream 10000 false chr3: 34954985-34964984 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026522 5273 Angiosperm View MSA
122314473 5265 Fabidae View MSA
124069204 5270 Rosid View MSA
123746526 5271 Pentapetalae View MSA
122790333 5272 Eudicot View MSA
121348454 5274 Embryophyte View MSA
123428131 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.126       Low
cufflinks 56.75     High  
cufflinks 45.731     High  
cufflinks 45.19     High  
cufflinks 62.215     High  
cufflinks 38.638     High  
cufflinks 30.278     High  
cufflinks 50.557     High  
cufflinks 51.386     High  

0 Strain