Gene : Medtr3g077620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12326 - PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN Description:  phox (PX) domain protein
Genomic Order:  3916 Name:  ? Medtr3g077620
Secondary Identifier:  ? PAC:31054314
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g077620 0.5kb upstream 0.5kb upstream 6983 true chr3: 34884050-34891032 Medicago truncatula
Medtr3g077620 0.5kb upstream 0.5kb upstream 500 false chr3: 34884050-34884549 Medicago truncatula
Medtr3g077620 0.5kb downstream 0.5kb downstream 6983 true chr3: 34884550-34891532 Medicago truncatula
Medtr3g077620 0.5kb downstream 0.5kb downstream 500 false chr3: 34891033-34891532 Medicago truncatula
Medtr3g077620 1.0kb upstream 1.0kb upstream 7483 true chr3: 34883550-34891032 Medicago truncatula
Medtr3g077620 1.0kb upstream 1.0kb upstream 1000 false chr3: 34883550-34884549 Medicago truncatula
Medtr3g077620 1.0kb downstream 1.0kb downstream 7483 true chr3: 34884550-34892032 Medicago truncatula
Medtr3g077620 1.0kb downstream 1.0kb downstream 1000 false chr3: 34891033-34892032 Medicago truncatula
Medtr3g077620 2.0kb upstream 2.0kb upstream 8483 true chr3: 34882550-34891032 Medicago truncatula
Medtr3g077620 2.0kb upstream 2.0kb upstream 2000 false chr3: 34882550-34884549 Medicago truncatula
Medtr3g077620 2.0kb downstream 2.0kb downstream 8483 true chr3: 34884550-34893032 Medicago truncatula
Medtr3g077620 2.0kb downstream 2.0kb downstream 2000 false chr3: 34891033-34893032 Medicago truncatula
Medtr3g077620 5.0kb upstream 5.0kb upstream 11483 true chr3: 34879550-34891032 Medicago truncatula
Medtr3g077620 5.0kb upstream 5.0kb upstream 5000 false chr3: 34879550-34884549 Medicago truncatula
Medtr3g077620 5.0kb downstream 5.0kb downstream 11483 true chr3: 34884550-34896032 Medicago truncatula
Medtr3g077620 5.0kb downstream 5.0kb downstream 5000 false chr3: 34891033-34896032 Medicago truncatula
Medtr3g077620 10.0kb upstream 10.0kb upstream 16483 true chr3: 34874550-34891032 Medicago truncatula
Medtr3g077620 10.0kb upstream 10.0kb upstream 10000 false chr3: 34874550-34884549 Medicago truncatula
Medtr3g077620 10.0kb downstream 10.0kb downstream 16483 true chr3: 34884550-34901032 Medicago truncatula
Medtr3g077620 10.0kb downstream 10.0kb downstream 10000 false chr3: 34891033-34901032 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300619 5265 Fabidae View MSA
124060618 5270 Rosid View MSA
123737398 5271 Pentapetalae View MSA
122793571 5272 Eudicot View MSA
122042332 5273 Angiosperm View MSA
121350531 5274 Embryophyte View MSA
123381775 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.024       High
cufflinks 1.409        
cufflinks 2.09       High
cufflinks 0.591       Low
cufflinks 1.173        
cufflinks 0.767       Low
cufflinks 1.83        
cufflinks 1.496        
cufflinks 1.041        

0 Strain