Gene : Medtr3g065020 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Description:  zinc finger-like protein
Genomic Order:  3183 Name:  ? Medtr3g065020
Secondary Identifier:  ? PAC:31056396
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g065020 0.5kb upstream 0.5kb upstream 3098 true chr3: 29334747-29337844 Medicago truncatula
Medtr3g065020 0.5kb upstream 0.5kb upstream 500 false chr3: 29337345-29337844 Medicago truncatula
Medtr3g065020 0.5kb downstream 0.5kb downstream 3098 true chr3: 29334247-29337344 Medicago truncatula
Medtr3g065020 0.5kb downstream 0.5kb downstream 500 false chr3: 29334247-29334746 Medicago truncatula
Medtr3g065020 1.0kb upstream 1.0kb upstream 3598 true chr3: 29334747-29338344 Medicago truncatula
Medtr3g065020 1.0kb upstream 1.0kb upstream 1000 false chr3: 29337345-29338344 Medicago truncatula
Medtr3g065020 1.0kb downstream 1.0kb downstream 3598 true chr3: 29333747-29337344 Medicago truncatula
Medtr3g065020 1.0kb downstream 1.0kb downstream 1000 false chr3: 29333747-29334746 Medicago truncatula
Medtr3g065020 2.0kb upstream 2.0kb upstream 4598 true chr3: 29334747-29339344 Medicago truncatula
Medtr3g065020 2.0kb upstream 2.0kb upstream 2000 false chr3: 29337345-29339344 Medicago truncatula
Medtr3g065020 2.0kb downstream 2.0kb downstream 4598 true chr3: 29332747-29337344 Medicago truncatula
Medtr3g065020 2.0kb downstream 2.0kb downstream 2000 false chr3: 29332747-29334746 Medicago truncatula
Medtr3g065020 5.0kb upstream 5.0kb upstream 7598 true chr3: 29334747-29342344 Medicago truncatula
Medtr3g065020 5.0kb upstream 5.0kb upstream 5000 false chr3: 29337345-29342344 Medicago truncatula
Medtr3g065020 5.0kb downstream 5.0kb downstream 7598 true chr3: 29329747-29337344 Medicago truncatula
Medtr3g065020 5.0kb downstream 5.0kb downstream 5000 false chr3: 29329747-29334746 Medicago truncatula
Medtr3g065020 10.0kb upstream 10.0kb upstream 12598 true chr3: 29334747-29347344 Medicago truncatula
Medtr3g065020 10.0kb upstream 10.0kb upstream 10000 false chr3: 29337345-29347344 Medicago truncatula
Medtr3g065020 10.0kb downstream 10.0kb downstream 12598 true chr3: 29324747-29337344 Medicago truncatula
Medtr3g065020 10.0kb downstream 10.0kb downstream 10000 false chr3: 29324747-29334746 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312694 5265 Fabidae View MSA
124072732 5270 Rosid View MSA
123749551 5271 Pentapetalae View MSA
122797803 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.362        
cufflinks 0.255        
cufflinks 0.307        
cufflinks 1.471       High
cufflinks 0.36        
cufflinks 0.448        
cufflinks 1.43       High
cufflinks 0.227       Low
cufflinks 1.307       High

0 Strain