Gene : Medtr3g064810 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21320:SF3 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL Description:  cytochrome C oxidase assembly protein CtaG/COX11
Genomic Order:  3169 Name:  ? Medtr3g064810
Secondary Identifier:  ? PAC:31058156
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g064810 0.5kb upstream 0.5kb upstream 2489 true chr3: 29218654-29221142 Medicago truncatula
Medtr3g064810 0.5kb upstream 0.5kb upstream 500 false chr3: 29220643-29221142 Medicago truncatula
Medtr3g064810 0.5kb downstream 0.5kb downstream 2489 true chr3: 29218154-29220642 Medicago truncatula
Medtr3g064810 0.5kb downstream 0.5kb downstream 500 false chr3: 29218154-29218653 Medicago truncatula
Medtr3g064810 1.0kb upstream 1.0kb upstream 2989 true chr3: 29218654-29221642 Medicago truncatula
Medtr3g064810 1.0kb upstream 1.0kb upstream 1000 false chr3: 29220643-29221642 Medicago truncatula
Medtr3g064810 1.0kb downstream 1.0kb downstream 2989 true chr3: 29217654-29220642 Medicago truncatula
Medtr3g064810 1.0kb downstream 1.0kb downstream 1000 false chr3: 29217654-29218653 Medicago truncatula
Medtr3g064810 2.0kb upstream 2.0kb upstream 3989 true chr3: 29218654-29222642 Medicago truncatula
Medtr3g064810 2.0kb upstream 2.0kb upstream 2000 false chr3: 29220643-29222642 Medicago truncatula
Medtr3g064810 2.0kb downstream 2.0kb downstream 3989 true chr3: 29216654-29220642 Medicago truncatula
Medtr3g064810 2.0kb downstream 2.0kb downstream 2000 false chr3: 29216654-29218653 Medicago truncatula
Medtr3g064810 5.0kb upstream 5.0kb upstream 6989 true chr3: 29218654-29225642 Medicago truncatula
Medtr3g064810 5.0kb upstream 5.0kb upstream 5000 false chr3: 29220643-29225642 Medicago truncatula
Medtr3g064810 5.0kb downstream 5.0kb downstream 6989 true chr3: 29213654-29220642 Medicago truncatula
Medtr3g064810 5.0kb downstream 5.0kb downstream 5000 false chr3: 29213654-29218653 Medicago truncatula
Medtr3g064810 10.0kb upstream 10.0kb upstream 11989 true chr3: 29218654-29230642 Medicago truncatula
Medtr3g064810 10.0kb upstream 10.0kb upstream 10000 false chr3: 29220643-29230642 Medicago truncatula
Medtr3g064810 10.0kb downstream 10.0kb downstream 11989 true chr3: 29208654-29220642 Medicago truncatula
Medtr3g064810 10.0kb downstream 10.0kb downstream 10000 false chr3: 29208654-29218653 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122260333 5265 Fabidae Singleton cluster - no MSA
124061652 5270 Rosid View MSA
123747181 5271 Pentapetalae View MSA
122787948 5272 Eudicot View MSA
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07        
cufflinks 0.07        
cufflinks 0.099        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.105        
cufflinks 0.061     Low  
cufflinks 0.151       High
cufflinks 0.055     Low Low
cufflinks 0.11        

0 Strain