Gene : Medtr3g067690 M. truncatula Mt4.0v1
Defline:  (1 of 3) 3.4.21.108 - HtrA2 peptidase / Serine proteinase OMI Description:  DegP protease-like protein
Genomic Order:  3297 Name:  ? Medtr3g067690
Secondary Identifier:  ? PAC:31057914
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g067690 0.5kb upstream 0.5kb upstream 17511 true chr3: 30299377-30316887 Medicago truncatula
Medtr3g067690 0.5kb upstream 0.5kb upstream 500 false chr3: 30299377-30299876 Medicago truncatula
Medtr3g067690 0.5kb downstream 0.5kb downstream 17511 true chr3: 30299877-30317387 Medicago truncatula
Medtr3g067690 0.5kb downstream 0.5kb downstream 500 false chr3: 30316888-30317387 Medicago truncatula
Medtr3g067690 1.0kb upstream 1.0kb upstream 18011 true chr3: 30298877-30316887 Medicago truncatula
Medtr3g067690 1.0kb upstream 1.0kb upstream 1000 false chr3: 30298877-30299876 Medicago truncatula
Medtr3g067690 1.0kb downstream 1.0kb downstream 18011 true chr3: 30299877-30317887 Medicago truncatula
Medtr3g067690 1.0kb downstream 1.0kb downstream 1000 false chr3: 30316888-30317887 Medicago truncatula
Medtr3g067690 2.0kb upstream 2.0kb upstream 19011 true chr3: 30297877-30316887 Medicago truncatula
Medtr3g067690 2.0kb upstream 2.0kb upstream 2000 false chr3: 30297877-30299876 Medicago truncatula
Medtr3g067690 2.0kb downstream 2.0kb downstream 19011 true chr3: 30299877-30318887 Medicago truncatula
Medtr3g067690 2.0kb downstream 2.0kb downstream 2000 false chr3: 30316888-30318887 Medicago truncatula
Medtr3g067690 5.0kb upstream 5.0kb upstream 22011 true chr3: 30294877-30316887 Medicago truncatula
Medtr3g067690 5.0kb upstream 5.0kb upstream 5000 false chr3: 30294877-30299876 Medicago truncatula
Medtr3g067690 5.0kb downstream 5.0kb downstream 22011 true chr3: 30299877-30321887 Medicago truncatula
Medtr3g067690 5.0kb downstream 5.0kb downstream 5000 false chr3: 30316888-30321887 Medicago truncatula
Medtr3g067690 10.0kb upstream 10.0kb upstream 27011 true chr3: 30289877-30316887 Medicago truncatula
Medtr3g067690 10.0kb upstream 10.0kb upstream 10000 false chr3: 30289877-30299876 Medicago truncatula
Medtr3g067690 10.0kb downstream 10.0kb downstream 27011 true chr3: 30299877-30326887 Medicago truncatula
Medtr3g067690 10.0kb downstream 10.0kb downstream 10000 false chr3: 30316888-30326887 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304692 5265 Fabidae View MSA
124066487 5270 Rosid View MSA
123749112 5271 Pentapetalae View MSA
122789271 5272 Eudicot View MSA
122042652 5273 Angiosperm View MSA
121347619 5274 Embryophyte View MSA
123428262 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.294        
cufflinks 3.467        
cufflinks 2.744        
cufflinks 0.662       Low
cufflinks 4.008        
cufflinks 0.413       Low
cufflinks 2.104        
cufflinks 2.402        
cufflinks 3.363        

0 Strain