Gene : Medtr3g069080 M. truncatula Mt4.0v1
Defline:  (1 of 4) 1.2.1.41 - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase Description:  delta-1-pyrroline-5-carboxylate synthetase
Genomic Order:  3378 Name:  ? Medtr3g069080
Secondary Identifier:  ? PAC:31056218
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PROSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g069080 0.5kb upstream 0.5kb upstream 6985 true chr3: 30923321-30930305 Medicago truncatula
Medtr3g069080 0.5kb upstream 0.5kb upstream 500 false chr3: 30929806-30930305 Medicago truncatula
Medtr3g069080 0.5kb downstream 0.5kb downstream 6985 true chr3: 30922821-30929805 Medicago truncatula
Medtr3g069080 0.5kb downstream 0.5kb downstream 500 false chr3: 30922821-30923320 Medicago truncatula
Medtr3g069080 1.0kb upstream 1.0kb upstream 7485 true chr3: 30923321-30930805 Medicago truncatula
Medtr3g069080 1.0kb upstream 1.0kb upstream 1000 false chr3: 30929806-30930805 Medicago truncatula
Medtr3g069080 1.0kb downstream 1.0kb downstream 7485 true chr3: 30922321-30929805 Medicago truncatula
Medtr3g069080 1.0kb downstream 1.0kb downstream 1000 false chr3: 30922321-30923320 Medicago truncatula
Medtr3g069080 2.0kb upstream 2.0kb upstream 8485 true chr3: 30923321-30931805 Medicago truncatula
Medtr3g069080 2.0kb upstream 2.0kb upstream 2000 false chr3: 30929806-30931805 Medicago truncatula
Medtr3g069080 2.0kb downstream 2.0kb downstream 8485 true chr3: 30921321-30929805 Medicago truncatula
Medtr3g069080 2.0kb downstream 2.0kb downstream 2000 false chr3: 30921321-30923320 Medicago truncatula
Medtr3g069080 5.0kb upstream 5.0kb upstream 11485 true chr3: 30923321-30934805 Medicago truncatula
Medtr3g069080 5.0kb upstream 5.0kb upstream 5000 false chr3: 30929806-30934805 Medicago truncatula
Medtr3g069080 5.0kb downstream 5.0kb downstream 11485 true chr3: 30918321-30929805 Medicago truncatula
Medtr3g069080 5.0kb downstream 5.0kb downstream 5000 false chr3: 30918321-30923320 Medicago truncatula
Medtr3g069080 10.0kb upstream 10.0kb upstream 16485 true chr3: 30923321-30939805 Medicago truncatula
Medtr3g069080 10.0kb upstream 10.0kb upstream 10000 false chr3: 30929806-30939805 Medicago truncatula
Medtr3g069080 10.0kb downstream 10.0kb downstream 16485 true chr3: 30913321-30929805 Medicago truncatula
Medtr3g069080 10.0kb downstream 10.0kb downstream 10000 false chr3: 30913321-30923320 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311815 5265 Fabidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.499        
cufflinks 7.164        
cufflinks 4.617        
cufflinks 2.213       Low
cufflinks 7.446        
cufflinks 1.807       Low
cufflinks 5.364        
cufflinks 5.868        
cufflinks 7.164        

0 Strain