Gene : Medtr3g068150 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Description:  thylakoid lumenal 15 kDa protein
Genomic Order:  3360 Name:  ? Medtr3g068150
Secondary Identifier:  ? PAC:31058529
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g068150 0.5kb upstream 0.5kb upstream 4659 true chr3: 30781995-30786653 Medicago truncatula
Medtr3g068150 0.5kb upstream 0.5kb upstream 500 false chr3: 30786154-30786653 Medicago truncatula
Medtr3g068150 0.5kb downstream 0.5kb downstream 4659 true chr3: 30781495-30786153 Medicago truncatula
Medtr3g068150 0.5kb downstream 0.5kb downstream 500 false chr3: 30781495-30781994 Medicago truncatula
Medtr3g068150 1.0kb upstream 1.0kb upstream 5159 true chr3: 30781995-30787153 Medicago truncatula
Medtr3g068150 1.0kb upstream 1.0kb upstream 1000 false chr3: 30786154-30787153 Medicago truncatula
Medtr3g068150 1.0kb downstream 1.0kb downstream 5159 true chr3: 30780995-30786153 Medicago truncatula
Medtr3g068150 1.0kb downstream 1.0kb downstream 1000 false chr3: 30780995-30781994 Medicago truncatula
Medtr3g068150 2.0kb upstream 2.0kb upstream 6159 true chr3: 30781995-30788153 Medicago truncatula
Medtr3g068150 2.0kb upstream 2.0kb upstream 2000 false chr3: 30786154-30788153 Medicago truncatula
Medtr3g068150 2.0kb downstream 2.0kb downstream 6159 true chr3: 30779995-30786153 Medicago truncatula
Medtr3g068150 2.0kb downstream 2.0kb downstream 2000 false chr3: 30779995-30781994 Medicago truncatula
Medtr3g068150 5.0kb upstream 5.0kb upstream 9159 true chr3: 30781995-30791153 Medicago truncatula
Medtr3g068150 5.0kb upstream 5.0kb upstream 5000 false chr3: 30786154-30791153 Medicago truncatula
Medtr3g068150 5.0kb downstream 5.0kb downstream 9159 true chr3: 30776995-30786153 Medicago truncatula
Medtr3g068150 5.0kb downstream 5.0kb downstream 5000 false chr3: 30776995-30781994 Medicago truncatula
Medtr3g068150 10.0kb upstream 10.0kb upstream 14159 true chr3: 30781995-30796153 Medicago truncatula
Medtr3g068150 10.0kb upstream 10.0kb upstream 10000 false chr3: 30786154-30796153 Medicago truncatula
Medtr3g068150 10.0kb downstream 10.0kb downstream 14159 true chr3: 30771995-30786153 Medicago truncatula
Medtr3g068150 10.0kb downstream 10.0kb downstream 10000 false chr3: 30771995-30781994 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305033 5265 Fabidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.482        
cufflinks 11.688     High  
cufflinks 16.888     High High
cufflinks 0.143        
cufflinks 12.6     High  
cufflinks 0.185        
cufflinks 0.187        
cufflinks 14.732     High High
cufflinks 0.046     Low Low

0 Strain