Gene : Medtr3g068035 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31100:SF13 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 15 Description:  AT hook motif DNA-binding family protein
Genomic Order:  3345 Name:  ? Medtr3g068035
Secondary Identifier:  ? PAC:31056234
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g068035 0.5kb upstream 0.5kb upstream 3928 true chr3: 30677310-30681237 Medicago truncatula
Medtr3g068035 0.5kb upstream 0.5kb upstream 500 false chr3: 30680738-30681237 Medicago truncatula
Medtr3g068035 0.5kb downstream 0.5kb downstream 3928 true chr3: 30676810-30680737 Medicago truncatula
Medtr3g068035 0.5kb downstream 0.5kb downstream 500 false chr3: 30676810-30677309 Medicago truncatula
Medtr3g068035 1.0kb upstream 1.0kb upstream 4428 true chr3: 30677310-30681737 Medicago truncatula
Medtr3g068035 1.0kb upstream 1.0kb upstream 1000 false chr3: 30680738-30681737 Medicago truncatula
Medtr3g068035 1.0kb downstream 1.0kb downstream 4428 true chr3: 30676310-30680737 Medicago truncatula
Medtr3g068035 1.0kb downstream 1.0kb downstream 1000 false chr3: 30676310-30677309 Medicago truncatula
Medtr3g068035 2.0kb upstream 2.0kb upstream 5428 true chr3: 30677310-30682737 Medicago truncatula
Medtr3g068035 2.0kb upstream 2.0kb upstream 2000 false chr3: 30680738-30682737 Medicago truncatula
Medtr3g068035 2.0kb downstream 2.0kb downstream 5428 true chr3: 30675310-30680737 Medicago truncatula
Medtr3g068035 2.0kb downstream 2.0kb downstream 2000 false chr3: 30675310-30677309 Medicago truncatula
Medtr3g068035 5.0kb upstream 5.0kb upstream 8428 true chr3: 30677310-30685737 Medicago truncatula
Medtr3g068035 5.0kb upstream 5.0kb upstream 5000 false chr3: 30680738-30685737 Medicago truncatula
Medtr3g068035 5.0kb downstream 5.0kb downstream 8428 true chr3: 30672310-30680737 Medicago truncatula
Medtr3g068035 5.0kb downstream 5.0kb downstream 5000 false chr3: 30672310-30677309 Medicago truncatula
Medtr3g068035 10.0kb upstream 10.0kb upstream 13428 true chr3: 30677310-30690737 Medicago truncatula
Medtr3g068035 10.0kb upstream 10.0kb upstream 10000 false chr3: 30680738-30690737 Medicago truncatula
Medtr3g068035 10.0kb downstream 10.0kb downstream 13428 true chr3: 30667310-30680737 Medicago truncatula
Medtr3g068035 10.0kb downstream 10.0kb downstream 10000 false chr3: 30667310-30677309 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303036 5265 Fabidae View MSA
124060975 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.515     High  
cufflinks 16.388     High  
cufflinks 21.073     High  
cufflinks 16.155     High  
cufflinks 12.932     High  
cufflinks 7.81       Low
cufflinks 29.741     High High
cufflinks 19.202     High  
cufflinks 22.912     High  

0 Strain