Gene : Medtr3g069590 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33101:SF4 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5-RELATED Description:  RHO guanyl-nucleotide exchange factor
Genomic Order:  3408 Name:  ? Medtr3g069590
Secondary Identifier:  ? PAC:31058899
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g069590 0.5kb upstream 0.5kb upstream 4583 true chr3: 31127698-31132280 Medicago truncatula
Medtr3g069590 0.5kb upstream 0.5kb upstream 500 false chr3: 31131781-31132280 Medicago truncatula
Medtr3g069590 0.5kb downstream 0.5kb downstream 4583 true chr3: 31127198-31131780 Medicago truncatula
Medtr3g069590 0.5kb downstream 0.5kb downstream 500 false chr3: 31127198-31127697 Medicago truncatula
Medtr3g069590 1.0kb upstream 1.0kb upstream 5083 true chr3: 31127698-31132780 Medicago truncatula
Medtr3g069590 1.0kb upstream 1.0kb upstream 1000 false chr3: 31131781-31132780 Medicago truncatula
Medtr3g069590 1.0kb downstream 1.0kb downstream 5083 true chr3: 31126698-31131780 Medicago truncatula
Medtr3g069590 1.0kb downstream 1.0kb downstream 1000 false chr3: 31126698-31127697 Medicago truncatula
Medtr3g069590 2.0kb upstream 2.0kb upstream 6083 true chr3: 31127698-31133780 Medicago truncatula
Medtr3g069590 2.0kb upstream 2.0kb upstream 2000 false chr3: 31131781-31133780 Medicago truncatula
Medtr3g069590 2.0kb downstream 2.0kb downstream 6083 true chr3: 31125698-31131780 Medicago truncatula
Medtr3g069590 2.0kb downstream 2.0kb downstream 2000 false chr3: 31125698-31127697 Medicago truncatula
Medtr3g069590 5.0kb upstream 5.0kb upstream 9083 true chr3: 31127698-31136780 Medicago truncatula
Medtr3g069590 5.0kb upstream 5.0kb upstream 5000 false chr3: 31131781-31136780 Medicago truncatula
Medtr3g069590 5.0kb downstream 5.0kb downstream 9083 true chr3: 31122698-31131780 Medicago truncatula
Medtr3g069590 5.0kb downstream 5.0kb downstream 5000 false chr3: 31122698-31127697 Medicago truncatula
Medtr3g069590 10.0kb upstream 10.0kb upstream 14083 true chr3: 31127698-31141780 Medicago truncatula
Medtr3g069590 10.0kb upstream 10.0kb upstream 10000 false chr3: 31131781-31141780 Medicago truncatula
Medtr3g069590 10.0kb downstream 10.0kb downstream 14083 true chr3: 31117698-31131780 Medicago truncatula
Medtr3g069590 10.0kb downstream 10.0kb downstream 10000 false chr3: 31117698-31127697 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303061 5265 Fabidae View MSA
124075143 5270 Rosid View MSA
123746088 5271 Pentapetalae View MSA
122792106 5272 Eudicot View MSA
122045104 5273 Angiosperm View MSA
121349126 5274 Embryophyte View MSA
123381182 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.727       High
cufflinks 0.134        
cufflinks 0.144        
cufflinks 0.104       Low
cufflinks 0.1       Low
cufflinks 0.324        
cufflinks 0.357        
cufflinks 0.147        
cufflinks 0.484       High

0 Strain