Gene : Medtr3g070290 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.1.1.148 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase Description:  anthranilate synthase alpha 1
Genomic Order:  3462 Name:  ? Medtr3g070290
Secondary Identifier:  ? PAC:31058573
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6545 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070290 0.5kb upstream 0.5kb upstream 6122 true chr3: 31500981-31507102 Medicago truncatula
Medtr3g070290 0.5kb upstream 0.5kb upstream 500 false chr3: 31500981-31501480 Medicago truncatula
Medtr3g070290 0.5kb downstream 0.5kb downstream 6122 true chr3: 31501481-31507602 Medicago truncatula
Medtr3g070290 0.5kb downstream 0.5kb downstream 500 false chr3: 31507103-31507602 Medicago truncatula
Medtr3g070290 1.0kb upstream 1.0kb upstream 6622 true chr3: 31500481-31507102 Medicago truncatula
Medtr3g070290 1.0kb upstream 1.0kb upstream 1000 false chr3: 31500481-31501480 Medicago truncatula
Medtr3g070290 1.0kb downstream 1.0kb downstream 6622 true chr3: 31501481-31508102 Medicago truncatula
Medtr3g070290 1.0kb downstream 1.0kb downstream 1000 false chr3: 31507103-31508102 Medicago truncatula
Medtr3g070290 2.0kb upstream 2.0kb upstream 7622 true chr3: 31499481-31507102 Medicago truncatula
Medtr3g070290 2.0kb upstream 2.0kb upstream 2000 false chr3: 31499481-31501480 Medicago truncatula
Medtr3g070290 2.0kb downstream 2.0kb downstream 7622 true chr3: 31501481-31509102 Medicago truncatula
Medtr3g070290 2.0kb downstream 2.0kb downstream 2000 false chr3: 31507103-31509102 Medicago truncatula
Medtr3g070290 5.0kb upstream 5.0kb upstream 10622 true chr3: 31496481-31507102 Medicago truncatula
Medtr3g070290 5.0kb upstream 5.0kb upstream 5000 false chr3: 31496481-31501480 Medicago truncatula
Medtr3g070290 5.0kb downstream 5.0kb downstream 10622 true chr3: 31501481-31512102 Medicago truncatula
Medtr3g070290 5.0kb downstream 5.0kb downstream 5000 false chr3: 31507103-31512102 Medicago truncatula
Medtr3g070290 10.0kb upstream 10.0kb upstream 15622 true chr3: 31491481-31507102 Medicago truncatula
Medtr3g070290 10.0kb upstream 10.0kb upstream 10000 false chr3: 31491481-31501480 Medicago truncatula
Medtr3g070290 10.0kb downstream 10.0kb downstream 15622 true chr3: 31501481-31517102 Medicago truncatula
Medtr3g070290 10.0kb downstream 10.0kb downstream 10000 false chr3: 31507103-31517102 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310045 5265 Fabidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.285       Low
cufflinks 2.978       High
cufflinks 2.234        
cufflinks 0.555        
cufflinks 2.239        
cufflinks 0.435       Low
cufflinks 0.629        
cufflinks 3.086       High
cufflinks 1.521        

0 Strain