Gene : Medtr3g070970 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF181 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Description:  transcription factor
Genomic Order:  3507 Name:  ? Medtr3g070970
Secondary Identifier:  ? PAC:31053514
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070970 0.5kb upstream 0.5kb upstream 2630 true chr3: 31862754-31865383 Medicago truncatula
Medtr3g070970 0.5kb upstream 0.5kb upstream 500 false chr3: 31862754-31863253 Medicago truncatula
Medtr3g070970 0.5kb downstream 0.5kb downstream 2630 true chr3: 31863254-31865883 Medicago truncatula
Medtr3g070970 0.5kb downstream 0.5kb downstream 500 false chr3: 31865384-31865883 Medicago truncatula
Medtr3g070970 1.0kb upstream 1.0kb upstream 3130 true chr3: 31862254-31865383 Medicago truncatula
Medtr3g070970 1.0kb upstream 1.0kb upstream 1000 false chr3: 31862254-31863253 Medicago truncatula
Medtr3g070970 1.0kb downstream 1.0kb downstream 3130 true chr3: 31863254-31866383 Medicago truncatula
Medtr3g070970 1.0kb downstream 1.0kb downstream 1000 false chr3: 31865384-31866383 Medicago truncatula
Medtr3g070970 2.0kb upstream 2.0kb upstream 4130 true chr3: 31861254-31865383 Medicago truncatula
Medtr3g070970 2.0kb upstream 2.0kb upstream 2000 false chr3: 31861254-31863253 Medicago truncatula
Medtr3g070970 2.0kb downstream 2.0kb downstream 4130 true chr3: 31863254-31867383 Medicago truncatula
Medtr3g070970 2.0kb downstream 2.0kb downstream 2000 false chr3: 31865384-31867383 Medicago truncatula
Medtr3g070970 5.0kb upstream 5.0kb upstream 7130 true chr3: 31858254-31865383 Medicago truncatula
Medtr3g070970 5.0kb upstream 5.0kb upstream 5000 false chr3: 31858254-31863253 Medicago truncatula
Medtr3g070970 5.0kb downstream 5.0kb downstream 7130 true chr3: 31863254-31870383 Medicago truncatula
Medtr3g070970 5.0kb downstream 5.0kb downstream 5000 false chr3: 31865384-31870383 Medicago truncatula
Medtr3g070970 10.0kb upstream 10.0kb upstream 12130 true chr3: 31853254-31865383 Medicago truncatula
Medtr3g070970 10.0kb upstream 10.0kb upstream 10000 false chr3: 31853254-31863253 Medicago truncatula
Medtr3g070970 10.0kb downstream 10.0kb downstream 12130 true chr3: 31863254-31875383 Medicago truncatula
Medtr3g070970 10.0kb downstream 10.0kb downstream 10000 false chr3: 31865384-31875383 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306982 5265 Fabidae View MSA
124063256 5270 Rosid View MSA
123736392 5271 Pentapetalae View MSA
122786016 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.275       Low
cufflinks 8.516       High
cufflinks 5.261        
cufflinks 1.354        
cufflinks 8.868       High
cufflinks 0.281       Low
cufflinks 0.772        
cufflinks 7.627       High
cufflinks 0.613        

0 Strain