Gene : Medtr3g071320 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31642:SF19 - COA-DEPENDENT ACYLTRANSFERASE-RELATED Description:  HXXXD-type acyl-transferase family protein
Genomic Order:  3520 Name:  ? Medtr3g071320
Secondary Identifier:  ? PAC:31057796
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7120 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g071320 0.5kb upstream 0.5kb upstream 2209 true chr3: 31994073-31996281 Medicago truncatula
Medtr3g071320 0.5kb upstream 0.5kb upstream 500 false chr3: 31994073-31994572 Medicago truncatula
Medtr3g071320 0.5kb downstream 0.5kb downstream 2209 true chr3: 31994573-31996781 Medicago truncatula
Medtr3g071320 0.5kb downstream 0.5kb downstream 500 false chr3: 31996282-31996781 Medicago truncatula
Medtr3g071320 1.0kb upstream 1.0kb upstream 2709 true chr3: 31993573-31996281 Medicago truncatula
Medtr3g071320 1.0kb upstream 1.0kb upstream 1000 false chr3: 31993573-31994572 Medicago truncatula
Medtr3g071320 1.0kb downstream 1.0kb downstream 2709 true chr3: 31994573-31997281 Medicago truncatula
Medtr3g071320 1.0kb downstream 1.0kb downstream 1000 false chr3: 31996282-31997281 Medicago truncatula
Medtr3g071320 2.0kb upstream 2.0kb upstream 3709 true chr3: 31992573-31996281 Medicago truncatula
Medtr3g071320 2.0kb upstream 2.0kb upstream 2000 false chr3: 31992573-31994572 Medicago truncatula
Medtr3g071320 2.0kb downstream 2.0kb downstream 3709 true chr3: 31994573-31998281 Medicago truncatula
Medtr3g071320 2.0kb downstream 2.0kb downstream 2000 false chr3: 31996282-31998281 Medicago truncatula
Medtr3g071320 5.0kb upstream 5.0kb upstream 6709 true chr3: 31989573-31996281 Medicago truncatula
Medtr3g071320 5.0kb upstream 5.0kb upstream 5000 false chr3: 31989573-31994572 Medicago truncatula
Medtr3g071320 5.0kb downstream 5.0kb downstream 6709 true chr3: 31994573-32001281 Medicago truncatula
Medtr3g071320 5.0kb downstream 5.0kb downstream 5000 false chr3: 31996282-32001281 Medicago truncatula
Medtr3g071320 10.0kb upstream 10.0kb upstream 11709 true chr3: 31984573-31996281 Medicago truncatula
Medtr3g071320 10.0kb upstream 10.0kb upstream 10000 false chr3: 31984573-31994572 Medicago truncatula
Medtr3g071320 10.0kb downstream 10.0kb downstream 11709 true chr3: 31994573-32006281 Medicago truncatula
Medtr3g071320 10.0kb downstream 10.0kb downstream 10000 false chr3: 31996282-32006281 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309459 5265 Fabidae View MSA
124067473 5270 Rosid View MSA
123738260 5271 Pentapetalae View MSA
122769918 5272 Eudicot View MSA
122042472 5273 Angiosperm View MSA
121309973 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.405       Low
cufflinks 9.575     High High
cufflinks 6.33        
cufflinks 3.02        
cufflinks 5.649        
cufflinks 1.855        
cufflinks 0.507       Low
cufflinks 8.749       High
cufflinks 1.772        

0 Strain