Gene : Medtr3g070940 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF01394 - Clathrin propeller repeat (Clathrin_propel) Description:  clathrin heavy chain
Genomic Order:  3505 Name:  ? Medtr3g070940
Secondary Identifier:  ? PAC:31053200
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070940 0.5kb upstream 0.5kb upstream 13808 true chr3: 31837985-31851792 Medicago truncatula
Medtr3g070940 0.5kb upstream 0.5kb upstream 500 false chr3: 31837985-31838484 Medicago truncatula
Medtr3g070940 0.5kb downstream 0.5kb downstream 13808 true chr3: 31838485-31852292 Medicago truncatula
Medtr3g070940 0.5kb downstream 0.5kb downstream 500 false chr3: 31851793-31852292 Medicago truncatula
Medtr3g070940 1.0kb upstream 1.0kb upstream 14308 true chr3: 31837485-31851792 Medicago truncatula
Medtr3g070940 1.0kb upstream 1.0kb upstream 1000 false chr3: 31837485-31838484 Medicago truncatula
Medtr3g070940 1.0kb downstream 1.0kb downstream 14308 true chr3: 31838485-31852792 Medicago truncatula
Medtr3g070940 1.0kb downstream 1.0kb downstream 1000 false chr3: 31851793-31852792 Medicago truncatula
Medtr3g070940 2.0kb upstream 2.0kb upstream 15308 true chr3: 31836485-31851792 Medicago truncatula
Medtr3g070940 2.0kb upstream 2.0kb upstream 2000 false chr3: 31836485-31838484 Medicago truncatula
Medtr3g070940 2.0kb downstream 2.0kb downstream 15308 true chr3: 31838485-31853792 Medicago truncatula
Medtr3g070940 2.0kb downstream 2.0kb downstream 2000 false chr3: 31851793-31853792 Medicago truncatula
Medtr3g070940 5.0kb upstream 5.0kb upstream 18308 true chr3: 31833485-31851792 Medicago truncatula
Medtr3g070940 5.0kb upstream 5.0kb upstream 5000 false chr3: 31833485-31838484 Medicago truncatula
Medtr3g070940 5.0kb downstream 5.0kb downstream 18308 true chr3: 31838485-31856792 Medicago truncatula
Medtr3g070940 5.0kb downstream 5.0kb downstream 5000 false chr3: 31851793-31856792 Medicago truncatula
Medtr3g070940 10.0kb upstream 10.0kb upstream 23308 true chr3: 31828485-31851792 Medicago truncatula
Medtr3g070940 10.0kb upstream 10.0kb upstream 10000 false chr3: 31828485-31838484 Medicago truncatula
Medtr3g070940 10.0kb downstream 10.0kb downstream 23308 true chr3: 31838485-31861792 Medicago truncatula
Medtr3g070940 10.0kb downstream 10.0kb downstream 10000 false chr3: 31851793-31861792 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
122311720 5265 Fabidae View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.525     High  
cufflinks 34.293     High High
cufflinks 20.583     High  
cufflinks 10.856     High  
cufflinks 29.491     High  
cufflinks 5.014       Low
cufflinks 16.635     High  
cufflinks 21.465     High  
cufflinks 21.259     High  

0 Strain