Gene : Medtr3g070720 M. truncatula Mt4.0v1
Defline:  (1 of 16) 3.1.4.11 - Phosphoinositide phospholipase C / Triphosphoinositide phosphodiesterase Description:  phosphatidylinositol-specific phospholipase C
Genomic Order:  3489 Name:  ? Medtr3g070720
Secondary Identifier:  ? PAC:31054156
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6367 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g070720 0.5kb upstream 0.5kb upstream 5433 true chr3: 31706663-31712095 Medicago truncatula
Medtr3g070720 0.5kb upstream 0.5kb upstream 500 false chr3: 31706663-31707162 Medicago truncatula
Medtr3g070720 0.5kb downstream 0.5kb downstream 5433 true chr3: 31707163-31712595 Medicago truncatula
Medtr3g070720 0.5kb downstream 0.5kb downstream 500 false chr3: 31712096-31712595 Medicago truncatula
Medtr3g070720 1.0kb upstream 1.0kb upstream 5933 true chr3: 31706163-31712095 Medicago truncatula
Medtr3g070720 1.0kb upstream 1.0kb upstream 1000 false chr3: 31706163-31707162 Medicago truncatula
Medtr3g070720 1.0kb downstream 1.0kb downstream 5933 true chr3: 31707163-31713095 Medicago truncatula
Medtr3g070720 1.0kb downstream 1.0kb downstream 1000 false chr3: 31712096-31713095 Medicago truncatula
Medtr3g070720 2.0kb upstream 2.0kb upstream 6933 true chr3: 31705163-31712095 Medicago truncatula
Medtr3g070720 2.0kb upstream 2.0kb upstream 2000 false chr3: 31705163-31707162 Medicago truncatula
Medtr3g070720 2.0kb downstream 2.0kb downstream 6933 true chr3: 31707163-31714095 Medicago truncatula
Medtr3g070720 2.0kb downstream 2.0kb downstream 2000 false chr3: 31712096-31714095 Medicago truncatula
Medtr3g070720 5.0kb upstream 5.0kb upstream 9933 true chr3: 31702163-31712095 Medicago truncatula
Medtr3g070720 5.0kb upstream 5.0kb upstream 5000 false chr3: 31702163-31707162 Medicago truncatula
Medtr3g070720 5.0kb downstream 5.0kb downstream 9933 true chr3: 31707163-31717095 Medicago truncatula
Medtr3g070720 5.0kb downstream 5.0kb downstream 5000 false chr3: 31712096-31717095 Medicago truncatula
Medtr3g070720 10.0kb upstream 10.0kb upstream 14933 true chr3: 31697163-31712095 Medicago truncatula
Medtr3g070720 10.0kb upstream 10.0kb upstream 10000 false chr3: 31697163-31707162 Medicago truncatula
Medtr3g070720 10.0kb downstream 10.0kb downstream 14933 true chr3: 31707163-31722095 Medicago truncatula
Medtr3g070720 10.0kb downstream 10.0kb downstream 10000 false chr3: 31712096-31722095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311245 5265 Fabidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.956        
cufflinks 7.737        
cufflinks 17.126     High High
cufflinks 4.457       Low
cufflinks 8.899        
cufflinks 5.761       Low
cufflinks 16.674     High  
cufflinks 8.603        
cufflinks 22.245     High High

0 Strain