Gene : Medtr3g071620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24031:SF2 - ATP-DEPENDENT RNA HELICASE DDX55 Description:  DEAD-box ATP-dependent RNA helicase-like protein
Genomic Order:  3544 Name:  ? Medtr3g071620
Secondary Identifier:  ? PAC:31054950
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g071620 0.5kb upstream 0.5kb upstream 6150 true chr3: 32161537-32167686 Medicago truncatula
Medtr3g071620 0.5kb upstream 0.5kb upstream 500 false chr3: 32167187-32167686 Medicago truncatula
Medtr3g071620 0.5kb downstream 0.5kb downstream 6150 true chr3: 32161037-32167186 Medicago truncatula
Medtr3g071620 0.5kb downstream 0.5kb downstream 500 false chr3: 32161037-32161536 Medicago truncatula
Medtr3g071620 1.0kb upstream 1.0kb upstream 6650 true chr3: 32161537-32168186 Medicago truncatula
Medtr3g071620 1.0kb upstream 1.0kb upstream 1000 false chr3: 32167187-32168186 Medicago truncatula
Medtr3g071620 1.0kb downstream 1.0kb downstream 6650 true chr3: 32160537-32167186 Medicago truncatula
Medtr3g071620 1.0kb downstream 1.0kb downstream 1000 false chr3: 32160537-32161536 Medicago truncatula
Medtr3g071620 2.0kb upstream 2.0kb upstream 7650 true chr3: 32161537-32169186 Medicago truncatula
Medtr3g071620 2.0kb upstream 2.0kb upstream 2000 false chr3: 32167187-32169186 Medicago truncatula
Medtr3g071620 2.0kb downstream 2.0kb downstream 7650 true chr3: 32159537-32167186 Medicago truncatula
Medtr3g071620 2.0kb downstream 2.0kb downstream 2000 false chr3: 32159537-32161536 Medicago truncatula
Medtr3g071620 5.0kb upstream 5.0kb upstream 10650 true chr3: 32161537-32172186 Medicago truncatula
Medtr3g071620 5.0kb upstream 5.0kb upstream 5000 false chr3: 32167187-32172186 Medicago truncatula
Medtr3g071620 5.0kb downstream 5.0kb downstream 10650 true chr3: 32156537-32167186 Medicago truncatula
Medtr3g071620 5.0kb downstream 5.0kb downstream 5000 false chr3: 32156537-32161536 Medicago truncatula
Medtr3g071620 10.0kb upstream 10.0kb upstream 15650 true chr3: 32161537-32177186 Medicago truncatula
Medtr3g071620 10.0kb upstream 10.0kb upstream 10000 false chr3: 32167187-32177186 Medicago truncatula
Medtr3g071620 10.0kb downstream 10.0kb downstream 15650 true chr3: 32151537-32167186 Medicago truncatula
Medtr3g071620 10.0kb downstream 10.0kb downstream 10000 false chr3: 32151537-32161536 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306552 5265 Fabidae View MSA
124068016 5270 Rosid View MSA
123739491 5271 Pentapetalae View MSA
122792074 5272 Eudicot View MSA
122042767 5273 Angiosperm View MSA
123429160 5275 Viridiplantae View MSA
121346858 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.121        
cufflinks 2.382        
cufflinks 2.371        
cufflinks 1.153       Low
cufflinks 3.494       High
cufflinks 1.011       Low
cufflinks 1.66        
cufflinks 1.863        
cufflinks 1.398        

0 Strain