Gene : Medtr3g071460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR14030//PTHR14030:SF2 - MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 Description:  Mad3/BUB1 hoMad3/BUB1-like region protein
Genomic Order:  3529 Name:  ? Medtr3g071460
Secondary Identifier:  ? PAC:31061027
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g071460 0.5kb upstream 0.5kb upstream 3240 true chr3: 32059925-32063164 Medicago truncatula
Medtr3g071460 0.5kb upstream 0.5kb upstream 500 false chr3: 32059925-32060424 Medicago truncatula
Medtr3g071460 0.5kb downstream 0.5kb downstream 3240 true chr3: 32060425-32063664 Medicago truncatula
Medtr3g071460 0.5kb downstream 0.5kb downstream 500 false chr3: 32063165-32063664 Medicago truncatula
Medtr3g071460 1.0kb upstream 1.0kb upstream 3740 true chr3: 32059425-32063164 Medicago truncatula
Medtr3g071460 1.0kb upstream 1.0kb upstream 1000 false chr3: 32059425-32060424 Medicago truncatula
Medtr3g071460 1.0kb downstream 1.0kb downstream 3740 true chr3: 32060425-32064164 Medicago truncatula
Medtr3g071460 1.0kb downstream 1.0kb downstream 1000 false chr3: 32063165-32064164 Medicago truncatula
Medtr3g071460 2.0kb upstream 2.0kb upstream 4740 true chr3: 32058425-32063164 Medicago truncatula
Medtr3g071460 2.0kb upstream 2.0kb upstream 2000 false chr3: 32058425-32060424 Medicago truncatula
Medtr3g071460 2.0kb downstream 2.0kb downstream 4740 true chr3: 32060425-32065164 Medicago truncatula
Medtr3g071460 2.0kb downstream 2.0kb downstream 2000 false chr3: 32063165-32065164 Medicago truncatula
Medtr3g071460 5.0kb upstream 5.0kb upstream 7740 true chr3: 32055425-32063164 Medicago truncatula
Medtr3g071460 5.0kb upstream 5.0kb upstream 5000 false chr3: 32055425-32060424 Medicago truncatula
Medtr3g071460 5.0kb downstream 5.0kb downstream 7740 true chr3: 32060425-32068164 Medicago truncatula
Medtr3g071460 5.0kb downstream 5.0kb downstream 5000 false chr3: 32063165-32068164 Medicago truncatula
Medtr3g071460 10.0kb upstream 10.0kb upstream 12740 true chr3: 32050425-32063164 Medicago truncatula
Medtr3g071460 10.0kb upstream 10.0kb upstream 10000 false chr3: 32050425-32060424 Medicago truncatula
Medtr3g071460 10.0kb downstream 10.0kb downstream 12740 true chr3: 32060425-32073164 Medicago truncatula
Medtr3g071460 10.0kb downstream 10.0kb downstream 10000 false chr3: 32063165-32073164 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040950 5273 Angiosperm View MSA
122302314 5265 Fabidae View MSA
124070685 5270 Rosid View MSA
123736871 5271 Pentapetalae View MSA
122786848 5272 Eudicot View MSA
121350124 5274 Embryophyte View MSA
123427088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13        
cufflinks 0.131        
cufflinks 0.072     Low Low
cufflinks 0.266        
cufflinks 0.102        
cufflinks 0.415       High
cufflinks 0.389        
cufflinks 0.128        
cufflinks 0.53       High

0 Strain