Gene : Medtr3g056070 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31791:SF13 - FRIGIDA-LIKE PROTEIN 5 Description:  frigida-LIKE protein
Genomic Order:  2315 Name:  ? Medtr3g056070
Secondary Identifier:  ? PAC:31058704
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g056070 0.5kb upstream 0.5kb upstream 4902 true chr3: 22277530-22282431 Medicago truncatula
Medtr3g056070 0.5kb upstream 0.5kb upstream 500 false chr3: 22277530-22278029 Medicago truncatula
Medtr3g056070 0.5kb downstream 0.5kb downstream 4902 true chr3: 22278030-22282931 Medicago truncatula
Medtr3g056070 0.5kb downstream 0.5kb downstream 500 false chr3: 22282432-22282931 Medicago truncatula
Medtr3g056070 1.0kb upstream 1.0kb upstream 5402 true chr3: 22277030-22282431 Medicago truncatula
Medtr3g056070 1.0kb upstream 1.0kb upstream 1000 false chr3: 22277030-22278029 Medicago truncatula
Medtr3g056070 1.0kb downstream 1.0kb downstream 5402 true chr3: 22278030-22283431 Medicago truncatula
Medtr3g056070 1.0kb downstream 1.0kb downstream 1000 false chr3: 22282432-22283431 Medicago truncatula
Medtr3g056070 2.0kb upstream 2.0kb upstream 6402 true chr3: 22276030-22282431 Medicago truncatula
Medtr3g056070 2.0kb upstream 2.0kb upstream 2000 false chr3: 22276030-22278029 Medicago truncatula
Medtr3g056070 2.0kb downstream 2.0kb downstream 6402 true chr3: 22278030-22284431 Medicago truncatula
Medtr3g056070 2.0kb downstream 2.0kb downstream 2000 false chr3: 22282432-22284431 Medicago truncatula
Medtr3g056070 5.0kb upstream 5.0kb upstream 9402 true chr3: 22273030-22282431 Medicago truncatula
Medtr3g056070 5.0kb upstream 5.0kb upstream 5000 false chr3: 22273030-22278029 Medicago truncatula
Medtr3g056070 5.0kb downstream 5.0kb downstream 9402 true chr3: 22278030-22287431 Medicago truncatula
Medtr3g056070 5.0kb downstream 5.0kb downstream 5000 false chr3: 22282432-22287431 Medicago truncatula
Medtr3g056070 10.0kb upstream 10.0kb upstream 14402 true chr3: 22268030-22282431 Medicago truncatula
Medtr3g056070 10.0kb upstream 10.0kb upstream 10000 false chr3: 22268030-22278029 Medicago truncatula
Medtr3g056070 10.0kb downstream 10.0kb downstream 14402 true chr3: 22278030-22292431 Medicago truncatula
Medtr3g056070 10.0kb downstream 10.0kb downstream 10000 false chr3: 22282432-22292431 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313510 5265 Fabidae View MSA
124072897 5270 Rosid View MSA
123741015 5271 Pentapetalae View MSA
122795482 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.398        
cufflinks 4.434        
cufflinks 5.634        
cufflinks 2.228        
cufflinks 4.994        
cufflinks 1.022       Low
cufflinks 2.852        
cufflinks 4.956        
cufflinks 2.673        

0 Strain