Gene : Medtr3g058580 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Description:  zinc ion-binding protein
Genomic Order:  2416 Name:  ? Medtr3g058580
Secondary Identifier:  ? PAC:31058416
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g058580 0.5kb upstream 0.5kb upstream 3253 true chr3: 23288255-23291507 Medicago truncatula
Medtr3g058580 0.5kb upstream 0.5kb upstream 500 false chr3: 23291008-23291507 Medicago truncatula
Medtr3g058580 0.5kb downstream 0.5kb downstream 3253 true chr3: 23287755-23291007 Medicago truncatula
Medtr3g058580 0.5kb downstream 0.5kb downstream 500 false chr3: 23287755-23288254 Medicago truncatula
Medtr3g058580 1.0kb upstream 1.0kb upstream 3753 true chr3: 23288255-23292007 Medicago truncatula
Medtr3g058580 1.0kb upstream 1.0kb upstream 1000 false chr3: 23291008-23292007 Medicago truncatula
Medtr3g058580 1.0kb downstream 1.0kb downstream 3753 true chr3: 23287255-23291007 Medicago truncatula
Medtr3g058580 1.0kb downstream 1.0kb downstream 1000 false chr3: 23287255-23288254 Medicago truncatula
Medtr3g058580 2.0kb upstream 2.0kb upstream 4753 true chr3: 23288255-23293007 Medicago truncatula
Medtr3g058580 2.0kb upstream 2.0kb upstream 2000 false chr3: 23291008-23293007 Medicago truncatula
Medtr3g058580 2.0kb downstream 2.0kb downstream 4753 true chr3: 23286255-23291007 Medicago truncatula
Medtr3g058580 2.0kb downstream 2.0kb downstream 2000 false chr3: 23286255-23288254 Medicago truncatula
Medtr3g058580 5.0kb upstream 5.0kb upstream 7753 true chr3: 23288255-23296007 Medicago truncatula
Medtr3g058580 5.0kb upstream 5.0kb upstream 5000 false chr3: 23291008-23296007 Medicago truncatula
Medtr3g058580 5.0kb downstream 5.0kb downstream 7753 true chr3: 23283255-23291007 Medicago truncatula
Medtr3g058580 5.0kb downstream 5.0kb downstream 5000 false chr3: 23283255-23288254 Medicago truncatula
Medtr3g058580 10.0kb upstream 10.0kb upstream 12753 true chr3: 23288255-23301007 Medicago truncatula
Medtr3g058580 10.0kb upstream 10.0kb upstream 10000 false chr3: 23291008-23301007 Medicago truncatula
Medtr3g058580 10.0kb downstream 10.0kb downstream 12753 true chr3: 23278255-23291007 Medicago truncatula
Medtr3g058580 10.0kb downstream 10.0kb downstream 10000 false chr3: 23278255-23288254 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306124 5265 Fabidae View MSA
124067155 5270 Rosid View MSA
123740113 5271 Pentapetalae View MSA
122785802 5272 Eudicot View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.972        
cufflinks 1.13        
cufflinks 1.534        
cufflinks 1.087        
cufflinks 1.705       High
cufflinks 0.367       Low
cufflinks 0.745        
cufflinks 1.126        
cufflinks 1.048        

0 Strain