Gene : Medtr3g058500 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF01426//PF05641 - BAH domain (BAH) // Agenet domain (Agenet) Description:  bromo adjacent-like domain protein
Genomic Order:  2408 Name:  ? Medtr3g058500
Secondary Identifier:  ? PAC:31058783
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g058500 0.5kb upstream 0.5kb upstream 4934 true chr3: 23245801-23250734 Medicago truncatula
Medtr3g058500 0.5kb upstream 0.5kb upstream 500 false chr3: 23245801-23246300 Medicago truncatula
Medtr3g058500 0.5kb downstream 0.5kb downstream 4934 true chr3: 23246301-23251234 Medicago truncatula
Medtr3g058500 0.5kb downstream 0.5kb downstream 500 false chr3: 23250735-23251234 Medicago truncatula
Medtr3g058500 1.0kb upstream 1.0kb upstream 5434 true chr3: 23245301-23250734 Medicago truncatula
Medtr3g058500 1.0kb upstream 1.0kb upstream 1000 false chr3: 23245301-23246300 Medicago truncatula
Medtr3g058500 1.0kb downstream 1.0kb downstream 5434 true chr3: 23246301-23251734 Medicago truncatula
Medtr3g058500 1.0kb downstream 1.0kb downstream 1000 false chr3: 23250735-23251734 Medicago truncatula
Medtr3g058500 2.0kb upstream 2.0kb upstream 6434 true chr3: 23244301-23250734 Medicago truncatula
Medtr3g058500 2.0kb upstream 2.0kb upstream 2000 false chr3: 23244301-23246300 Medicago truncatula
Medtr3g058500 2.0kb downstream 2.0kb downstream 6434 true chr3: 23246301-23252734 Medicago truncatula
Medtr3g058500 2.0kb downstream 2.0kb downstream 2000 false chr3: 23250735-23252734 Medicago truncatula
Medtr3g058500 5.0kb upstream 5.0kb upstream 9434 true chr3: 23241301-23250734 Medicago truncatula
Medtr3g058500 5.0kb upstream 5.0kb upstream 5000 false chr3: 23241301-23246300 Medicago truncatula
Medtr3g058500 5.0kb downstream 5.0kb downstream 9434 true chr3: 23246301-23255734 Medicago truncatula
Medtr3g058500 5.0kb downstream 5.0kb downstream 5000 false chr3: 23250735-23255734 Medicago truncatula
Medtr3g058500 10.0kb upstream 10.0kb upstream 14434 true chr3: 23236301-23250734 Medicago truncatula
Medtr3g058500 10.0kb upstream 10.0kb upstream 10000 false chr3: 23236301-23246300 Medicago truncatula
Medtr3g058500 10.0kb downstream 10.0kb downstream 14434 true chr3: 23246301-23260734 Medicago truncatula
Medtr3g058500 10.0kb downstream 10.0kb downstream 10000 false chr3: 23250735-23260734 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302137 5265 Fabidae View MSA
124060613 5270 Rosid View MSA
123742959 5271 Pentapetalae View MSA
122786842 5272 Eudicot View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.566        
cufflinks 11.244     High High
cufflinks 9.774        
cufflinks 1.696       Low
cufflinks 11.535     High High
cufflinks 2.036       Low
cufflinks 3.3        
cufflinks 8.578        
cufflinks 3.036        

0 Strain