Gene : Medtr3g056645 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24223:SF181 - ABC TRANSPORTER C FAMILY MEMBER 3-RELATED Description:  ABC transporter C family protein
Genomic Order:  2351 Name:  ? Medtr3g056645
Secondary Identifier:  ? PAC:31059327
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g056645 0.5kb upstream 0.5kb upstream 5201 true chr3: 22665145-22670345 Medicago truncatula
Medtr3g056645 0.5kb upstream 0.5kb upstream 500 false chr3: 22669846-22670345 Medicago truncatula
Medtr3g056645 0.5kb downstream 0.5kb downstream 5201 true chr3: 22664645-22669845 Medicago truncatula
Medtr3g056645 0.5kb downstream 0.5kb downstream 500 false chr3: 22664645-22665144 Medicago truncatula
Medtr3g056645 1.0kb upstream 1.0kb upstream 5701 true chr3: 22665145-22670845 Medicago truncatula
Medtr3g056645 1.0kb upstream 1.0kb upstream 1000 false chr3: 22669846-22670845 Medicago truncatula
Medtr3g056645 1.0kb downstream 1.0kb downstream 5701 true chr3: 22664145-22669845 Medicago truncatula
Medtr3g056645 1.0kb downstream 1.0kb downstream 1000 false chr3: 22664145-22665144 Medicago truncatula
Medtr3g056645 2.0kb upstream 2.0kb upstream 6701 true chr3: 22665145-22671845 Medicago truncatula
Medtr3g056645 2.0kb upstream 2.0kb upstream 2000 false chr3: 22669846-22671845 Medicago truncatula
Medtr3g056645 2.0kb downstream 2.0kb downstream 6701 true chr3: 22663145-22669845 Medicago truncatula
Medtr3g056645 2.0kb downstream 2.0kb downstream 2000 false chr3: 22663145-22665144 Medicago truncatula
Medtr3g056645 5.0kb upstream 5.0kb upstream 9701 true chr3: 22665145-22674845 Medicago truncatula
Medtr3g056645 5.0kb upstream 5.0kb upstream 5000 false chr3: 22669846-22674845 Medicago truncatula
Medtr3g056645 5.0kb downstream 5.0kb downstream 9701 true chr3: 22660145-22669845 Medicago truncatula
Medtr3g056645 5.0kb downstream 5.0kb downstream 5000 false chr3: 22660145-22665144 Medicago truncatula
Medtr3g056645 10.0kb upstream 10.0kb upstream 14701 true chr3: 22665145-22679845 Medicago truncatula
Medtr3g056645 10.0kb upstream 10.0kb upstream 10000 false chr3: 22669846-22679845 Medicago truncatula
Medtr3g056645 10.0kb downstream 10.0kb downstream 14701 true chr3: 22655145-22669845 Medicago truncatula
Medtr3g056645 10.0kb downstream 10.0kb downstream 10000 false chr3: 22655145-22665144 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296320 5265 Fabidae View MSA
124074189 5270 Rosid View MSA
123753057 5271 Pentapetalae View MSA
122797435 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216        
cufflinks 3.649       High
cufflinks 1.14        
cufflinks 0.106        
cufflinks 3.508       High
cufflinks 0.026     Low Low
cufflinks 0.067     Low  
cufflinks 1.439        
cufflinks 0.066     Low  

0 Strain