Gene : Medtr3g058930 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR35708:SF1 - GB Description:  transmembrane protein, putative
Genomic Order:  2444 Name:  ? Medtr3g058930
Secondary Identifier:  ? PAC:31054301
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g058930 0.5kb upstream 0.5kb upstream 2331 true chr3: 23529382-23531712 Medicago truncatula
Medtr3g058930 0.5kb upstream 0.5kb upstream 500 false chr3: 23529382-23529881 Medicago truncatula
Medtr3g058930 0.5kb downstream 0.5kb downstream 2331 true chr3: 23529882-23532212 Medicago truncatula
Medtr3g058930 0.5kb downstream 0.5kb downstream 500 false chr3: 23531713-23532212 Medicago truncatula
Medtr3g058930 1.0kb upstream 1.0kb upstream 2831 true chr3: 23528882-23531712 Medicago truncatula
Medtr3g058930 1.0kb upstream 1.0kb upstream 1000 false chr3: 23528882-23529881 Medicago truncatula
Medtr3g058930 1.0kb downstream 1.0kb downstream 2831 true chr3: 23529882-23532712 Medicago truncatula
Medtr3g058930 1.0kb downstream 1.0kb downstream 1000 false chr3: 23531713-23532712 Medicago truncatula
Medtr3g058930 2.0kb upstream 2.0kb upstream 3831 true chr3: 23527882-23531712 Medicago truncatula
Medtr3g058930 2.0kb upstream 2.0kb upstream 2000 false chr3: 23527882-23529881 Medicago truncatula
Medtr3g058930 2.0kb downstream 2.0kb downstream 3831 true chr3: 23529882-23533712 Medicago truncatula
Medtr3g058930 2.0kb downstream 2.0kb downstream 2000 false chr3: 23531713-23533712 Medicago truncatula
Medtr3g058930 5.0kb upstream 5.0kb upstream 6831 true chr3: 23524882-23531712 Medicago truncatula
Medtr3g058930 5.0kb upstream 5.0kb upstream 5000 false chr3: 23524882-23529881 Medicago truncatula
Medtr3g058930 5.0kb downstream 5.0kb downstream 6831 true chr3: 23529882-23536712 Medicago truncatula
Medtr3g058930 5.0kb downstream 5.0kb downstream 5000 false chr3: 23531713-23536712 Medicago truncatula
Medtr3g058930 10.0kb upstream 10.0kb upstream 11831 true chr3: 23519882-23531712 Medicago truncatula
Medtr3g058930 10.0kb upstream 10.0kb upstream 10000 false chr3: 23519882-23529881 Medicago truncatula
Medtr3g058930 10.0kb downstream 10.0kb downstream 11831 true chr3: 23529882-23541712 Medicago truncatula
Medtr3g058930 10.0kb downstream 10.0kb downstream 10000 false chr3: 23531713-23541712 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298594 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.701        
cufflinks 2.197        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.257        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low Low
cufflinks 1.728        
cufflinks 0.02     Low Low

0 Strain