Gene : Medtr3g061510 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Description:  CCAAT-binding transcription factor
Genomic Order:  2556 Name:  ? Medtr3g061510
Secondary Identifier:  ? PAC:31057815
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g061510 0.5kb upstream 0.5kb upstream 4420 true chr3: 24529746-24534165 Medicago truncatula
Medtr3g061510 0.5kb upstream 0.5kb upstream 500 false chr3: 24533666-24534165 Medicago truncatula
Medtr3g061510 0.5kb downstream 0.5kb downstream 4420 true chr3: 24529246-24533665 Medicago truncatula
Medtr3g061510 0.5kb downstream 0.5kb downstream 500 false chr3: 24529246-24529745 Medicago truncatula
Medtr3g061510 1.0kb upstream 1.0kb upstream 4920 true chr3: 24529746-24534665 Medicago truncatula
Medtr3g061510 1.0kb upstream 1.0kb upstream 1000 false chr3: 24533666-24534665 Medicago truncatula
Medtr3g061510 1.0kb downstream 1.0kb downstream 4920 true chr3: 24528746-24533665 Medicago truncatula
Medtr3g061510 1.0kb downstream 1.0kb downstream 1000 false chr3: 24528746-24529745 Medicago truncatula
Medtr3g061510 2.0kb upstream 2.0kb upstream 5920 true chr3: 24529746-24535665 Medicago truncatula
Medtr3g061510 2.0kb upstream 2.0kb upstream 2000 false chr3: 24533666-24535665 Medicago truncatula
Medtr3g061510 2.0kb downstream 2.0kb downstream 5920 true chr3: 24527746-24533665 Medicago truncatula
Medtr3g061510 2.0kb downstream 2.0kb downstream 2000 false chr3: 24527746-24529745 Medicago truncatula
Medtr3g061510 5.0kb upstream 5.0kb upstream 8920 true chr3: 24529746-24538665 Medicago truncatula
Medtr3g061510 5.0kb upstream 5.0kb upstream 5000 false chr3: 24533666-24538665 Medicago truncatula
Medtr3g061510 5.0kb downstream 5.0kb downstream 8920 true chr3: 24524746-24533665 Medicago truncatula
Medtr3g061510 5.0kb downstream 5.0kb downstream 5000 false chr3: 24524746-24529745 Medicago truncatula
Medtr3g061510 10.0kb upstream 10.0kb upstream 13920 true chr3: 24529746-24543665 Medicago truncatula
Medtr3g061510 10.0kb upstream 10.0kb upstream 10000 false chr3: 24533666-24543665 Medicago truncatula
Medtr3g061510 10.0kb downstream 10.0kb downstream 13920 true chr3: 24519746-24533665 Medicago truncatula
Medtr3g061510 10.0kb downstream 10.0kb downstream 10000 false chr3: 24519746-24529745 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308884 5265 Fabidae View MSA
124064408 5270 Rosid View MSA
123744202 5271 Pentapetalae View MSA
122796368 5272 Eudicot View MSA
122043560 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.283        
cufflinks 4.586        
cufflinks 4.57        
cufflinks 5.189        
cufflinks 6.016       High
cufflinks 2.964       Low
cufflinks 5.36        
cufflinks 3.916        
cufflinks 3.449       Low

0 Strain