Gene : Medtr3g062980 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  3064
Name:  ? Medtr3g062980 Secondary Identifier:  ? PAC:31055963
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g062980 0.5kb upstream 0.5kb upstream 4784 true chr3: 28478928-28483711 Medicago truncatula
Medtr3g062980 0.5kb upstream 0.5kb upstream 500 false chr3: 28483212-28483711 Medicago truncatula
Medtr3g062980 0.5kb downstream 0.5kb downstream 4784 true chr3: 28478428-28483211 Medicago truncatula
Medtr3g062980 0.5kb downstream 0.5kb downstream 500 false chr3: 28478428-28478927 Medicago truncatula
Medtr3g062980 1.0kb upstream 1.0kb upstream 5284 true chr3: 28478928-28484211 Medicago truncatula
Medtr3g062980 1.0kb upstream 1.0kb upstream 1000 false chr3: 28483212-28484211 Medicago truncatula
Medtr3g062980 1.0kb downstream 1.0kb downstream 5284 true chr3: 28477928-28483211 Medicago truncatula
Medtr3g062980 1.0kb downstream 1.0kb downstream 1000 false chr3: 28477928-28478927 Medicago truncatula
Medtr3g062980 2.0kb upstream 2.0kb upstream 6284 true chr3: 28478928-28485211 Medicago truncatula
Medtr3g062980 2.0kb upstream 2.0kb upstream 2000 false chr3: 28483212-28485211 Medicago truncatula
Medtr3g062980 2.0kb downstream 2.0kb downstream 6284 true chr3: 28476928-28483211 Medicago truncatula
Medtr3g062980 2.0kb downstream 2.0kb downstream 2000 false chr3: 28476928-28478927 Medicago truncatula
Medtr3g062980 5.0kb upstream 5.0kb upstream 9284 true chr3: 28478928-28488211 Medicago truncatula
Medtr3g062980 5.0kb upstream 5.0kb upstream 5000 false chr3: 28483212-28488211 Medicago truncatula
Medtr3g062980 5.0kb downstream 5.0kb downstream 9284 true chr3: 28473928-28483211 Medicago truncatula
Medtr3g062980 5.0kb downstream 5.0kb downstream 5000 false chr3: 28473928-28478927 Medicago truncatula
Medtr3g062980 10.0kb upstream 10.0kb upstream 14284 true chr3: 28478928-28493211 Medicago truncatula
Medtr3g062980 10.0kb upstream 10.0kb upstream 10000 false chr3: 28483212-28493211 Medicago truncatula
Medtr3g062980 10.0kb downstream 10.0kb downstream 14284 true chr3: 28468928-28483211 Medicago truncatula
Medtr3g062980 10.0kb downstream 10.0kb downstream 10000 false chr3: 28468928-28478927 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121650153 5273 Angiosperm View MSA
122289901 5265 Fabidae View MSA
124029800 5270 Rosid View MSA
123603443 5271 Pentapetalae View MSA
122638109 5272 Eudicot View MSA
120922256 5274 Embryophyte View MSA
122962905 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.129        
cufflinks 0.857        
cufflinks 0.757        
cufflinks 0.082       Low
cufflinks 0.746        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.232        
cufflinks 1.031       High
cufflinks 0.126        

0 Strain