Gene : Medtr3g062490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10536 - DNA PRIMASE SMALL SUBUNIT Description:  DNA primase small subunit
Genomic Order:  3028 Name:  ? Medtr3g062490
Secondary Identifier:  ? PAC:31061618
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g062490 0.5kb upstream 0.5kb upstream 7373 true chr3: 28212716-28220088 Medicago truncatula
Medtr3g062490 0.5kb upstream 0.5kb upstream 500 false chr3: 28212716-28213215 Medicago truncatula
Medtr3g062490 0.5kb downstream 0.5kb downstream 7373 true chr3: 28213216-28220588 Medicago truncatula
Medtr3g062490 0.5kb downstream 0.5kb downstream 500 false chr3: 28220089-28220588 Medicago truncatula
Medtr3g062490 1.0kb upstream 1.0kb upstream 7873 true chr3: 28212216-28220088 Medicago truncatula
Medtr3g062490 1.0kb upstream 1.0kb upstream 1000 false chr3: 28212216-28213215 Medicago truncatula
Medtr3g062490 1.0kb downstream 1.0kb downstream 7873 true chr3: 28213216-28221088 Medicago truncatula
Medtr3g062490 1.0kb downstream 1.0kb downstream 1000 false chr3: 28220089-28221088 Medicago truncatula
Medtr3g062490 2.0kb upstream 2.0kb upstream 8873 true chr3: 28211216-28220088 Medicago truncatula
Medtr3g062490 2.0kb upstream 2.0kb upstream 2000 false chr3: 28211216-28213215 Medicago truncatula
Medtr3g062490 2.0kb downstream 2.0kb downstream 8873 true chr3: 28213216-28222088 Medicago truncatula
Medtr3g062490 2.0kb downstream 2.0kb downstream 2000 false chr3: 28220089-28222088 Medicago truncatula
Medtr3g062490 5.0kb upstream 5.0kb upstream 11873 true chr3: 28208216-28220088 Medicago truncatula
Medtr3g062490 5.0kb upstream 5.0kb upstream 5000 false chr3: 28208216-28213215 Medicago truncatula
Medtr3g062490 5.0kb downstream 5.0kb downstream 11873 true chr3: 28213216-28225088 Medicago truncatula
Medtr3g062490 5.0kb downstream 5.0kb downstream 5000 false chr3: 28220089-28225088 Medicago truncatula
Medtr3g062490 10.0kb upstream 10.0kb upstream 16873 true chr3: 28203216-28220088 Medicago truncatula
Medtr3g062490 10.0kb upstream 10.0kb upstream 10000 false chr3: 28203216-28213215 Medicago truncatula
Medtr3g062490 10.0kb downstream 10.0kb downstream 16873 true chr3: 28213216-28230088 Medicago truncatula
Medtr3g062490 10.0kb downstream 10.0kb downstream 10000 false chr3: 28220089-28230088 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302363 5265 Fabidae View MSA
124063611 5270 Rosid View MSA
123741537 5271 Pentapetalae View MSA
122792233 5272 Eudicot View MSA
122044142 5273 Angiosperm View MSA
121345966 5274 Embryophyte View MSA
123424761 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.676        
cufflinks 0.382        
cufflinks 0.217       Low
cufflinks 0.595        
cufflinks 0.222       Low
cufflinks 0.424        
cufflinks 1.392       High
cufflinks 0.257        
cufflinks 1.562       High

0 Strain