Gene : Medtr3g064070 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Description:  oxygen-evolving enhancer protein
Genomic Order:  3115 Name:  ? Medtr3g064070
Secondary Identifier:  ? PAC:31060864
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g064070 0.5kb upstream 0.5kb upstream 2668 true chr3: 28811278-28813945 Medicago truncatula
Medtr3g064070 0.5kb upstream 0.5kb upstream 500 false chr3: 28811278-28811777 Medicago truncatula
Medtr3g064070 0.5kb downstream 0.5kb downstream 2668 true chr3: 28811778-28814445 Medicago truncatula
Medtr3g064070 0.5kb downstream 0.5kb downstream 500 false chr3: 28813946-28814445 Medicago truncatula
Medtr3g064070 1.0kb upstream 1.0kb upstream 3168 true chr3: 28810778-28813945 Medicago truncatula
Medtr3g064070 1.0kb upstream 1.0kb upstream 1000 false chr3: 28810778-28811777 Medicago truncatula
Medtr3g064070 1.0kb downstream 1.0kb downstream 3168 true chr3: 28811778-28814945 Medicago truncatula
Medtr3g064070 1.0kb downstream 1.0kb downstream 1000 false chr3: 28813946-28814945 Medicago truncatula
Medtr3g064070 2.0kb upstream 2.0kb upstream 4168 true chr3: 28809778-28813945 Medicago truncatula
Medtr3g064070 2.0kb upstream 2.0kb upstream 2000 false chr3: 28809778-28811777 Medicago truncatula
Medtr3g064070 2.0kb downstream 2.0kb downstream 4168 true chr3: 28811778-28815945 Medicago truncatula
Medtr3g064070 2.0kb downstream 2.0kb downstream 2000 false chr3: 28813946-28815945 Medicago truncatula
Medtr3g064070 5.0kb upstream 5.0kb upstream 7168 true chr3: 28806778-28813945 Medicago truncatula
Medtr3g064070 5.0kb upstream 5.0kb upstream 5000 false chr3: 28806778-28811777 Medicago truncatula
Medtr3g064070 5.0kb downstream 5.0kb downstream 7168 true chr3: 28811778-28818945 Medicago truncatula
Medtr3g064070 5.0kb downstream 5.0kb downstream 5000 false chr3: 28813946-28818945 Medicago truncatula
Medtr3g064070 10.0kb upstream 10.0kb upstream 12168 true chr3: 28801778-28813945 Medicago truncatula
Medtr3g064070 10.0kb upstream 10.0kb upstream 10000 false chr3: 28801778-28811777 Medicago truncatula
Medtr3g064070 10.0kb downstream 10.0kb downstream 12168 true chr3: 28811778-28823945 Medicago truncatula
Medtr3g064070 10.0kb downstream 10.0kb downstream 10000 false chr3: 28813946-28823945 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312972 5265 Fabidae View MSA
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.119       Low
cufflinks 6.105        
cufflinks 6.744        
cufflinks 0.322        
cufflinks 10.118       High
cufflinks 1.392        
cufflinks 0.954        
cufflinks 8.831       High
cufflinks 0.206       Low

0 Strain