Gene : Medtr3g063320 M. truncatula Mt4.0v1
Description:  PPR domain protein Genomic Order:  3088
Name:  ? Medtr3g063320 Secondary Identifier:  ? PAC:31058047
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g063320 0.5kb upstream 0.5kb upstream 1433 true chr3: 28680436-28681868 Medicago truncatula
Medtr3g063320 0.5kb upstream 0.5kb upstream 500 false chr3: 28681369-28681868 Medicago truncatula
Medtr3g063320 0.5kb downstream 0.5kb downstream 1433 true chr3: 28679936-28681368 Medicago truncatula
Medtr3g063320 0.5kb downstream 0.5kb downstream 500 false chr3: 28679936-28680435 Medicago truncatula
Medtr3g063320 1.0kb upstream 1.0kb upstream 1933 true chr3: 28680436-28682368 Medicago truncatula
Medtr3g063320 1.0kb upstream 1.0kb upstream 1000 false chr3: 28681369-28682368 Medicago truncatula
Medtr3g063320 1.0kb downstream 1.0kb downstream 1933 true chr3: 28679436-28681368 Medicago truncatula
Medtr3g063320 1.0kb downstream 1.0kb downstream 1000 false chr3: 28679436-28680435 Medicago truncatula
Medtr3g063320 2.0kb upstream 2.0kb upstream 2933 true chr3: 28680436-28683368 Medicago truncatula
Medtr3g063320 2.0kb upstream 2.0kb upstream 2000 false chr3: 28681369-28683368 Medicago truncatula
Medtr3g063320 2.0kb downstream 2.0kb downstream 2933 true chr3: 28678436-28681368 Medicago truncatula
Medtr3g063320 2.0kb downstream 2.0kb downstream 2000 false chr3: 28678436-28680435 Medicago truncatula
Medtr3g063320 5.0kb upstream 5.0kb upstream 5933 true chr3: 28680436-28686368 Medicago truncatula
Medtr3g063320 5.0kb upstream 5.0kb upstream 5000 false chr3: 28681369-28686368 Medicago truncatula
Medtr3g063320 5.0kb downstream 5.0kb downstream 5933 true chr3: 28675436-28681368 Medicago truncatula
Medtr3g063320 5.0kb downstream 5.0kb downstream 5000 false chr3: 28675436-28680435 Medicago truncatula
Medtr3g063320 10.0kb upstream 10.0kb upstream 10933 true chr3: 28680436-28691368 Medicago truncatula
Medtr3g063320 10.0kb upstream 10.0kb upstream 10000 false chr3: 28681369-28691368 Medicago truncatula
Medtr3g063320 10.0kb downstream 10.0kb downstream 10933 true chr3: 28670436-28681368 Medicago truncatula
Medtr3g063320 10.0kb downstream 10.0kb downstream 10000 false chr3: 28670436-28680435 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121648630 5273 Angiosperm View MSA
122287579 5265 Fabidae View MSA
124028070 5270 Rosid View MSA
123601895 5271 Pentapetalae View MSA
122636586 5272 Eudicot View MSA
120920733 5274 Embryophyte View MSA
122961382 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.321       High
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.012     Low  
cufflinks 0.064     Low  

0 Strain