Gene : Medtr3g063200 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22904:SF373 - PROTEIN TIC 40, CHLOROPLASTIC Description:  hydroxyproline-rich glycoprotein family protein
Genomic Order:  3081 Name:  ? Medtr3g063200
Secondary Identifier:  ? PAC:31055536
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g063200 0.5kb upstream 0.5kb upstream 8093 true chr3: 28595531-28603623 Medicago truncatula
Medtr3g063200 0.5kb upstream 0.5kb upstream 500 false chr3: 28595531-28596030 Medicago truncatula
Medtr3g063200 0.5kb downstream 0.5kb downstream 8093 true chr3: 28596031-28604123 Medicago truncatula
Medtr3g063200 0.5kb downstream 0.5kb downstream 500 false chr3: 28603624-28604123 Medicago truncatula
Medtr3g063200 1.0kb upstream 1.0kb upstream 8593 true chr3: 28595031-28603623 Medicago truncatula
Medtr3g063200 1.0kb upstream 1.0kb upstream 1000 false chr3: 28595031-28596030 Medicago truncatula
Medtr3g063200 1.0kb downstream 1.0kb downstream 8593 true chr3: 28596031-28604623 Medicago truncatula
Medtr3g063200 1.0kb downstream 1.0kb downstream 1000 false chr3: 28603624-28604623 Medicago truncatula
Medtr3g063200 2.0kb upstream 2.0kb upstream 9593 true chr3: 28594031-28603623 Medicago truncatula
Medtr3g063200 2.0kb upstream 2.0kb upstream 2000 false chr3: 28594031-28596030 Medicago truncatula
Medtr3g063200 2.0kb downstream 2.0kb downstream 9593 true chr3: 28596031-28605623 Medicago truncatula
Medtr3g063200 2.0kb downstream 2.0kb downstream 2000 false chr3: 28603624-28605623 Medicago truncatula
Medtr3g063200 5.0kb upstream 5.0kb upstream 12593 true chr3: 28591031-28603623 Medicago truncatula
Medtr3g063200 5.0kb upstream 5.0kb upstream 5000 false chr3: 28591031-28596030 Medicago truncatula
Medtr3g063200 5.0kb downstream 5.0kb downstream 12593 true chr3: 28596031-28608623 Medicago truncatula
Medtr3g063200 5.0kb downstream 5.0kb downstream 5000 false chr3: 28603624-28608623 Medicago truncatula
Medtr3g063200 10.0kb upstream 10.0kb upstream 17593 true chr3: 28586031-28603623 Medicago truncatula
Medtr3g063200 10.0kb upstream 10.0kb upstream 10000 false chr3: 28586031-28596030 Medicago truncatula
Medtr3g063200 10.0kb downstream 10.0kb downstream 17593 true chr3: 28596031-28613623 Medicago truncatula
Medtr3g063200 10.0kb downstream 10.0kb downstream 10000 false chr3: 28603624-28613623 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306461 5265 Fabidae View MSA
124060602 5270 Rosid View MSA
123738700 5271 Pentapetalae View MSA
122785851 5272 Eudicot View MSA
122043574 5273 Angiosperm View MSA
121344558 5274 Embryophyte View MSA
123424576 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.469        
cufflinks 5.328        
cufflinks 4.733        
cufflinks 0.743       Low
cufflinks 8.047       High
cufflinks 0.43       Low
cufflinks 1.088        
cufflinks 5.018        
cufflinks 2.26        

0 Strain