Gene : Medtr3g064580 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31989:SF6 - F12P19.8 PROTEIN Description:  NAC transcription factor-like protein
Genomic Order:  3154 Name:  ? Medtr3g064580
Secondary Identifier:  ? PAC:31058734
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g064580 0.5kb upstream 0.5kb upstream 4635 true chr3: 29101201-29105835 Medicago truncatula
Medtr3g064580 0.5kb upstream 0.5kb upstream 500 false chr3: 29101201-29101700 Medicago truncatula
Medtr3g064580 0.5kb downstream 0.5kb downstream 4635 true chr3: 29101701-29106335 Medicago truncatula
Medtr3g064580 0.5kb downstream 0.5kb downstream 500 false chr3: 29105836-29106335 Medicago truncatula
Medtr3g064580 1.0kb upstream 1.0kb upstream 5135 true chr3: 29100701-29105835 Medicago truncatula
Medtr3g064580 1.0kb upstream 1.0kb upstream 1000 false chr3: 29100701-29101700 Medicago truncatula
Medtr3g064580 1.0kb downstream 1.0kb downstream 5135 true chr3: 29101701-29106835 Medicago truncatula
Medtr3g064580 1.0kb downstream 1.0kb downstream 1000 false chr3: 29105836-29106835 Medicago truncatula
Medtr3g064580 2.0kb upstream 2.0kb upstream 6135 true chr3: 29099701-29105835 Medicago truncatula
Medtr3g064580 2.0kb upstream 2.0kb upstream 2000 false chr3: 29099701-29101700 Medicago truncatula
Medtr3g064580 2.0kb downstream 2.0kb downstream 6135 true chr3: 29101701-29107835 Medicago truncatula
Medtr3g064580 2.0kb downstream 2.0kb downstream 2000 false chr3: 29105836-29107835 Medicago truncatula
Medtr3g064580 5.0kb upstream 5.0kb upstream 9135 true chr3: 29096701-29105835 Medicago truncatula
Medtr3g064580 5.0kb upstream 5.0kb upstream 5000 false chr3: 29096701-29101700 Medicago truncatula
Medtr3g064580 5.0kb downstream 5.0kb downstream 9135 true chr3: 29101701-29110835 Medicago truncatula
Medtr3g064580 5.0kb downstream 5.0kb downstream 5000 false chr3: 29105836-29110835 Medicago truncatula
Medtr3g064580 10.0kb upstream 10.0kb upstream 14135 true chr3: 29091701-29105835 Medicago truncatula
Medtr3g064580 10.0kb upstream 10.0kb upstream 10000 false chr3: 29091701-29101700 Medicago truncatula
Medtr3g064580 10.0kb downstream 10.0kb downstream 14135 true chr3: 29101701-29115835 Medicago truncatula
Medtr3g064580 10.0kb downstream 10.0kb downstream 10000 false chr3: 29105836-29115835 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311806 5265 Fabidae View MSA
124065157 5270 Rosid View MSA
123749136 5271 Pentapetalae View MSA
122793090 5272 Eudicot View MSA
122045532 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.355       Low
cufflinks 0.75        
cufflinks 0.771        
cufflinks 0.556        
cufflinks 0.916        
cufflinks 0.728        
cufflinks 0.801        
cufflinks 0.996       High
cufflinks 0.433       Low

0 Strain