Gene : Medtr3g098790 M. truncatula Mt4.0v1
Defline:  (1 of 127) PF02362 - B3 DNA binding domain (B3) Description:  plant-specific B3-DNA-binding domain protein
Genomic Order:  5358 Name:  ? Medtr3g098790
Secondary Identifier:  ? PAC:31060778
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g098790 0.5kb upstream 0.5kb upstream 2443 true chr3: 45268698-45271140 Medicago truncatula
Medtr3g098790 0.5kb upstream 0.5kb upstream 500 false chr3: 45268698-45269197 Medicago truncatula
Medtr3g098790 0.5kb downstream 0.5kb downstream 2443 true chr3: 45269198-45271640 Medicago truncatula
Medtr3g098790 0.5kb downstream 0.5kb downstream 500 false chr3: 45271141-45271640 Medicago truncatula
Medtr3g098790 1.0kb upstream 1.0kb upstream 2943 true chr3: 45268198-45271140 Medicago truncatula
Medtr3g098790 1.0kb upstream 1.0kb upstream 1000 false chr3: 45268198-45269197 Medicago truncatula
Medtr3g098790 1.0kb downstream 1.0kb downstream 2943 true chr3: 45269198-45272140 Medicago truncatula
Medtr3g098790 1.0kb downstream 1.0kb downstream 1000 false chr3: 45271141-45272140 Medicago truncatula
Medtr3g098790 2.0kb upstream 2.0kb upstream 3943 true chr3: 45267198-45271140 Medicago truncatula
Medtr3g098790 2.0kb upstream 2.0kb upstream 2000 false chr3: 45267198-45269197 Medicago truncatula
Medtr3g098790 2.0kb downstream 2.0kb downstream 3943 true chr3: 45269198-45273140 Medicago truncatula
Medtr3g098790 2.0kb downstream 2.0kb downstream 2000 false chr3: 45271141-45273140 Medicago truncatula
Medtr3g098790 5.0kb upstream 5.0kb upstream 6943 true chr3: 45264198-45271140 Medicago truncatula
Medtr3g098790 5.0kb upstream 5.0kb upstream 5000 false chr3: 45264198-45269197 Medicago truncatula
Medtr3g098790 5.0kb downstream 5.0kb downstream 6943 true chr3: 45269198-45276140 Medicago truncatula
Medtr3g098790 5.0kb downstream 5.0kb downstream 5000 false chr3: 45271141-45276140 Medicago truncatula
Medtr3g098790 10.0kb upstream 10.0kb upstream 11943 true chr3: 45259198-45271140 Medicago truncatula
Medtr3g098790 10.0kb upstream 10.0kb upstream 10000 false chr3: 45259198-45269197 Medicago truncatula
Medtr3g098790 10.0kb downstream 10.0kb downstream 11943 true chr3: 45269198-45281140 Medicago truncatula
Medtr3g098790 10.0kb downstream 10.0kb downstream 10000 false chr3: 45271141-45281140 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313165 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.047     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.012     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain