Gene : Medtr3g099220 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF14968 - Coiled coil protein 84 (CCDC84) Description:  hypothetical protein
Genomic Order:  5395 Name:  ? Medtr3g099220
Secondary Identifier:  ? PAC:31057893
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g099220 0.5kb upstream 0.5kb upstream 4493 true chr3: 45482434-45486926 Medicago truncatula
Medtr3g099220 0.5kb upstream 0.5kb upstream 500 false chr3: 45486427-45486926 Medicago truncatula
Medtr3g099220 0.5kb downstream 0.5kb downstream 4493 true chr3: 45481934-45486426 Medicago truncatula
Medtr3g099220 0.5kb downstream 0.5kb downstream 500 false chr3: 45481934-45482433 Medicago truncatula
Medtr3g099220 1.0kb upstream 1.0kb upstream 4993 true chr3: 45482434-45487426 Medicago truncatula
Medtr3g099220 1.0kb upstream 1.0kb upstream 1000 false chr3: 45486427-45487426 Medicago truncatula
Medtr3g099220 1.0kb downstream 1.0kb downstream 4993 true chr3: 45481434-45486426 Medicago truncatula
Medtr3g099220 1.0kb downstream 1.0kb downstream 1000 false chr3: 45481434-45482433 Medicago truncatula
Medtr3g099220 2.0kb upstream 2.0kb upstream 5993 true chr3: 45482434-45488426 Medicago truncatula
Medtr3g099220 2.0kb upstream 2.0kb upstream 2000 false chr3: 45486427-45488426 Medicago truncatula
Medtr3g099220 2.0kb downstream 2.0kb downstream 5993 true chr3: 45480434-45486426 Medicago truncatula
Medtr3g099220 2.0kb downstream 2.0kb downstream 2000 false chr3: 45480434-45482433 Medicago truncatula
Medtr3g099220 5.0kb upstream 5.0kb upstream 8993 true chr3: 45482434-45491426 Medicago truncatula
Medtr3g099220 5.0kb upstream 5.0kb upstream 5000 false chr3: 45486427-45491426 Medicago truncatula
Medtr3g099220 5.0kb downstream 5.0kb downstream 8993 true chr3: 45477434-45486426 Medicago truncatula
Medtr3g099220 5.0kb downstream 5.0kb downstream 5000 false chr3: 45477434-45482433 Medicago truncatula
Medtr3g099220 10.0kb upstream 10.0kb upstream 13993 true chr3: 45482434-45496426 Medicago truncatula
Medtr3g099220 10.0kb upstream 10.0kb upstream 10000 false chr3: 45486427-45496426 Medicago truncatula
Medtr3g099220 10.0kb downstream 10.0kb downstream 13993 true chr3: 45472434-45486426 Medicago truncatula
Medtr3g099220 10.0kb downstream 10.0kb downstream 10000 false chr3: 45472434-45482433 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310753 5265 Fabidae View MSA
124062307 5270 Rosid View MSA
123738908 5271 Pentapetalae View MSA
122785764 5272 Eudicot View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.674       High
cufflinks 1.032        
cufflinks 1.285        
cufflinks 0.887        
cufflinks 1.379        
cufflinks 0.619       Low
cufflinks 1.235        
cufflinks 0.96        
cufflinks 0.773        

0 Strain