Gene : Medtr3g099990 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG0059 - Lipid exporter ABCA1 and related proteins, ABC superfamily Description:  ABC transporter A family protein
Genomic Order:  5451 Name:  ? Medtr3g099990
Secondary Identifier:  ? PAC:31056990
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g099990 0.5kb upstream 0.5kb upstream 6243 true chr3: 45888396-45894638 Medicago truncatula
Medtr3g099990 0.5kb upstream 0.5kb upstream 500 false chr3: 45894139-45894638 Medicago truncatula
Medtr3g099990 0.5kb downstream 0.5kb downstream 6243 true chr3: 45887896-45894138 Medicago truncatula
Medtr3g099990 0.5kb downstream 0.5kb downstream 500 false chr3: 45887896-45888395 Medicago truncatula
Medtr3g099990 1.0kb upstream 1.0kb upstream 6743 true chr3: 45888396-45895138 Medicago truncatula
Medtr3g099990 1.0kb upstream 1.0kb upstream 1000 false chr3: 45894139-45895138 Medicago truncatula
Medtr3g099990 1.0kb downstream 1.0kb downstream 6743 true chr3: 45887396-45894138 Medicago truncatula
Medtr3g099990 1.0kb downstream 1.0kb downstream 1000 false chr3: 45887396-45888395 Medicago truncatula
Medtr3g099990 2.0kb upstream 2.0kb upstream 7743 true chr3: 45888396-45896138 Medicago truncatula
Medtr3g099990 2.0kb upstream 2.0kb upstream 2000 false chr3: 45894139-45896138 Medicago truncatula
Medtr3g099990 2.0kb downstream 2.0kb downstream 7743 true chr3: 45886396-45894138 Medicago truncatula
Medtr3g099990 2.0kb downstream 2.0kb downstream 2000 false chr3: 45886396-45888395 Medicago truncatula
Medtr3g099990 5.0kb upstream 5.0kb upstream 10743 true chr3: 45888396-45899138 Medicago truncatula
Medtr3g099990 5.0kb upstream 5.0kb upstream 5000 false chr3: 45894139-45899138 Medicago truncatula
Medtr3g099990 5.0kb downstream 5.0kb downstream 10743 true chr3: 45883396-45894138 Medicago truncatula
Medtr3g099990 5.0kb downstream 5.0kb downstream 5000 false chr3: 45883396-45888395 Medicago truncatula
Medtr3g099990 10.0kb upstream 10.0kb upstream 15743 true chr3: 45888396-45904138 Medicago truncatula
Medtr3g099990 10.0kb upstream 10.0kb upstream 10000 false chr3: 45894139-45904138 Medicago truncatula
Medtr3g099990 10.0kb downstream 10.0kb downstream 15743 true chr3: 45878396-45894138 Medicago truncatula
Medtr3g099990 10.0kb downstream 10.0kb downstream 10000 false chr3: 45878396-45888395 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301698 5265 Fabidae View MSA
124067078 5270 Rosid View MSA
123750252 5271 Pentapetalae View MSA
122786986 5272 Eudicot View MSA
122046360 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121347402 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low High
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  

0 Strain