Gene : Medtr3g099753 M. truncatula Mt4.0v1
Defline:  (1 of 492) PF01535 - PPR repeat (PPR) Description:  PPR containing plant-like protein
Genomic Order:  5433 Name:  ? Medtr3g099753
Secondary Identifier:  ? PAC:31055221
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g099753 0.5kb upstream 0.5kb upstream 2860 true chr3: 45737660-45740519 Medicago truncatula
Medtr3g099753 0.5kb upstream 0.5kb upstream 500 false chr3: 45737660-45738159 Medicago truncatula
Medtr3g099753 0.5kb downstream 0.5kb downstream 2860 true chr3: 45738160-45741019 Medicago truncatula
Medtr3g099753 0.5kb downstream 0.5kb downstream 500 false chr3: 45740520-45741019 Medicago truncatula
Medtr3g099753 1.0kb upstream 1.0kb upstream 3360 true chr3: 45737160-45740519 Medicago truncatula
Medtr3g099753 1.0kb upstream 1.0kb upstream 1000 false chr3: 45737160-45738159 Medicago truncatula
Medtr3g099753 1.0kb downstream 1.0kb downstream 3360 true chr3: 45738160-45741519 Medicago truncatula
Medtr3g099753 1.0kb downstream 1.0kb downstream 1000 false chr3: 45740520-45741519 Medicago truncatula
Medtr3g099753 2.0kb upstream 2.0kb upstream 4360 true chr3: 45736160-45740519 Medicago truncatula
Medtr3g099753 2.0kb upstream 2.0kb upstream 2000 false chr3: 45736160-45738159 Medicago truncatula
Medtr3g099753 2.0kb downstream 2.0kb downstream 4360 true chr3: 45738160-45742519 Medicago truncatula
Medtr3g099753 2.0kb downstream 2.0kb downstream 2000 false chr3: 45740520-45742519 Medicago truncatula
Medtr3g099753 5.0kb upstream 5.0kb upstream 7360 true chr3: 45733160-45740519 Medicago truncatula
Medtr3g099753 5.0kb upstream 5.0kb upstream 5000 false chr3: 45733160-45738159 Medicago truncatula
Medtr3g099753 5.0kb downstream 5.0kb downstream 7360 true chr3: 45738160-45745519 Medicago truncatula
Medtr3g099753 5.0kb downstream 5.0kb downstream 5000 false chr3: 45740520-45745519 Medicago truncatula
Medtr3g099753 10.0kb upstream 10.0kb upstream 12360 true chr3: 45728160-45740519 Medicago truncatula
Medtr3g099753 10.0kb upstream 10.0kb upstream 10000 false chr3: 45728160-45738159 Medicago truncatula
Medtr3g099753 10.0kb downstream 10.0kb downstream 12360 true chr3: 45738160-45750519 Medicago truncatula
Medtr3g099753 10.0kb downstream 10.0kb downstream 10000 false chr3: 45740520-45750519 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307467 5265 Fabidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.58        
cufflinks 1.113        
cufflinks 1.225        
cufflinks 0.127       Low
cufflinks 1.267       High
cufflinks 0.554        
cufflinks 0.348        
cufflinks 0.893        
cufflinks 0.348        

0 Strain