Gene : Medtr3g099850 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3117 - Protein involved in rRNA processing Description:  Sas10/Utp3/C1D family protein
Genomic Order:  5441 Name:  ? Medtr3g099850
Secondary Identifier:  ? PAC:31055198
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g099850 0.5kb upstream 0.5kb upstream 3653 true chr3: 45813153-45816805 Medicago truncatula
Medtr3g099850 0.5kb upstream 0.5kb upstream 500 false chr3: 45816306-45816805 Medicago truncatula
Medtr3g099850 0.5kb downstream 0.5kb downstream 3653 true chr3: 45812653-45816305 Medicago truncatula
Medtr3g099850 0.5kb downstream 0.5kb downstream 500 false chr3: 45812653-45813152 Medicago truncatula
Medtr3g099850 1.0kb upstream 1.0kb upstream 4153 true chr3: 45813153-45817305 Medicago truncatula
Medtr3g099850 1.0kb upstream 1.0kb upstream 1000 false chr3: 45816306-45817305 Medicago truncatula
Medtr3g099850 1.0kb downstream 1.0kb downstream 4153 true chr3: 45812153-45816305 Medicago truncatula
Medtr3g099850 1.0kb downstream 1.0kb downstream 1000 false chr3: 45812153-45813152 Medicago truncatula
Medtr3g099850 2.0kb upstream 2.0kb upstream 5153 true chr3: 45813153-45818305 Medicago truncatula
Medtr3g099850 2.0kb upstream 2.0kb upstream 2000 false chr3: 45816306-45818305 Medicago truncatula
Medtr3g099850 2.0kb downstream 2.0kb downstream 5153 true chr3: 45811153-45816305 Medicago truncatula
Medtr3g099850 2.0kb downstream 2.0kb downstream 2000 false chr3: 45811153-45813152 Medicago truncatula
Medtr3g099850 5.0kb upstream 5.0kb upstream 8153 true chr3: 45813153-45821305 Medicago truncatula
Medtr3g099850 5.0kb upstream 5.0kb upstream 5000 false chr3: 45816306-45821305 Medicago truncatula
Medtr3g099850 5.0kb downstream 5.0kb downstream 8153 true chr3: 45808153-45816305 Medicago truncatula
Medtr3g099850 5.0kb downstream 5.0kb downstream 5000 false chr3: 45808153-45813152 Medicago truncatula
Medtr3g099850 10.0kb upstream 10.0kb upstream 13153 true chr3: 45813153-45826305 Medicago truncatula
Medtr3g099850 10.0kb upstream 10.0kb upstream 10000 false chr3: 45816306-45826305 Medicago truncatula
Medtr3g099850 10.0kb downstream 10.0kb downstream 13153 true chr3: 45803153-45816305 Medicago truncatula
Medtr3g099850 10.0kb downstream 10.0kb downstream 10000 false chr3: 45803153-45813152 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300651 5265 Fabidae View MSA
124066836 5270 Rosid View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.727        
cufflinks 4.266        
cufflinks 4.34        
cufflinks 2.388       Low
cufflinks 7.302       High
cufflinks 1.747       Low
cufflinks 3.637        
cufflinks 4.543        
cufflinks 3.748        

0 Strain