Gene : Medtr3g099620 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11969//PTHR11969:SF19 - MAX DIMERIZATION, MAD Description:  basic helix loop helix (BHLH) DNA-binding family protein
Genomic Order:  5422 Name:  ? Medtr3g099620
Secondary Identifier:  ? PAC:31060352
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g099620 0.5kb upstream 0.5kb upstream 2919 true chr3: 45670902-45673820 Medicago truncatula
Medtr3g099620 0.5kb upstream 0.5kb upstream 500 false chr3: 45673321-45673820 Medicago truncatula
Medtr3g099620 0.5kb downstream 0.5kb downstream 2919 true chr3: 45670402-45673320 Medicago truncatula
Medtr3g099620 0.5kb downstream 0.5kb downstream 500 false chr3: 45670402-45670901 Medicago truncatula
Medtr3g099620 1.0kb upstream 1.0kb upstream 3419 true chr3: 45670902-45674320 Medicago truncatula
Medtr3g099620 1.0kb upstream 1.0kb upstream 1000 false chr3: 45673321-45674320 Medicago truncatula
Medtr3g099620 1.0kb downstream 1.0kb downstream 3419 true chr3: 45669902-45673320 Medicago truncatula
Medtr3g099620 1.0kb downstream 1.0kb downstream 1000 false chr3: 45669902-45670901 Medicago truncatula
Medtr3g099620 2.0kb upstream 2.0kb upstream 4419 true chr3: 45670902-45675320 Medicago truncatula
Medtr3g099620 2.0kb upstream 2.0kb upstream 2000 false chr3: 45673321-45675320 Medicago truncatula
Medtr3g099620 2.0kb downstream 2.0kb downstream 4419 true chr3: 45668902-45673320 Medicago truncatula
Medtr3g099620 2.0kb downstream 2.0kb downstream 2000 false chr3: 45668902-45670901 Medicago truncatula
Medtr3g099620 5.0kb upstream 5.0kb upstream 7419 true chr3: 45670902-45678320 Medicago truncatula
Medtr3g099620 5.0kb upstream 5.0kb upstream 5000 false chr3: 45673321-45678320 Medicago truncatula
Medtr3g099620 5.0kb downstream 5.0kb downstream 7419 true chr3: 45665902-45673320 Medicago truncatula
Medtr3g099620 5.0kb downstream 5.0kb downstream 5000 false chr3: 45665902-45670901 Medicago truncatula
Medtr3g099620 10.0kb upstream 10.0kb upstream 12419 true chr3: 45670902-45683320 Medicago truncatula
Medtr3g099620 10.0kb upstream 10.0kb upstream 10000 false chr3: 45673321-45683320 Medicago truncatula
Medtr3g099620 10.0kb downstream 10.0kb downstream 12419 true chr3: 45660902-45673320 Medicago truncatula
Medtr3g099620 10.0kb downstream 10.0kb downstream 10000 false chr3: 45660902-45670901 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311136 5265 Fabidae View MSA
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.787       High
cufflinks 0.04     Low  
cufflinks 0.025     Low Low
cufflinks 1.394        
cufflinks 0.075        
cufflinks 1.573        
cufflinks 6.563       High
cufflinks 0.021     Low Low
cufflinks 4.767        

0 Strain