Gene : Medtr3g099600 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR35689:SF1 - F10B6.4 Description:  BEST plant protein match is: (TAIR:plant.1) protein, putative
Genomic Order:  5421 Name:  ? Medtr3g099600
Secondary Identifier:  ? PAC:31055293
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g099600 0.5kb upstream 0.5kb upstream 3988 true chr3: 45658085-45662072 Medicago truncatula
Medtr3g099600 0.5kb upstream 0.5kb upstream 500 false chr3: 45661573-45662072 Medicago truncatula
Medtr3g099600 0.5kb downstream 0.5kb downstream 3988 true chr3: 45657585-45661572 Medicago truncatula
Medtr3g099600 0.5kb downstream 0.5kb downstream 500 false chr3: 45657585-45658084 Medicago truncatula
Medtr3g099600 1.0kb upstream 1.0kb upstream 4488 true chr3: 45658085-45662572 Medicago truncatula
Medtr3g099600 1.0kb upstream 1.0kb upstream 1000 false chr3: 45661573-45662572 Medicago truncatula
Medtr3g099600 1.0kb downstream 1.0kb downstream 4488 true chr3: 45657085-45661572 Medicago truncatula
Medtr3g099600 1.0kb downstream 1.0kb downstream 1000 false chr3: 45657085-45658084 Medicago truncatula
Medtr3g099600 2.0kb upstream 2.0kb upstream 5488 true chr3: 45658085-45663572 Medicago truncatula
Medtr3g099600 2.0kb upstream 2.0kb upstream 2000 false chr3: 45661573-45663572 Medicago truncatula
Medtr3g099600 2.0kb downstream 2.0kb downstream 5488 true chr3: 45656085-45661572 Medicago truncatula
Medtr3g099600 2.0kb downstream 2.0kb downstream 2000 false chr3: 45656085-45658084 Medicago truncatula
Medtr3g099600 5.0kb upstream 5.0kb upstream 8488 true chr3: 45658085-45666572 Medicago truncatula
Medtr3g099600 5.0kb upstream 5.0kb upstream 5000 false chr3: 45661573-45666572 Medicago truncatula
Medtr3g099600 5.0kb downstream 5.0kb downstream 8488 true chr3: 45653085-45661572 Medicago truncatula
Medtr3g099600 5.0kb downstream 5.0kb downstream 5000 false chr3: 45653085-45658084 Medicago truncatula
Medtr3g099600 10.0kb upstream 10.0kb upstream 13488 true chr3: 45658085-45671572 Medicago truncatula
Medtr3g099600 10.0kb upstream 10.0kb upstream 10000 false chr3: 45661573-45671572 Medicago truncatula
Medtr3g099600 10.0kb downstream 10.0kb downstream 13488 true chr3: 45648085-45661572 Medicago truncatula
Medtr3g099600 10.0kb downstream 10.0kb downstream 10000 false chr3: 45648085-45658084 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310443 5265 Fabidae View MSA
124061266 5270 Rosid View MSA
123741660 5271 Pentapetalae View MSA
122790535 5272 Eudicot View MSA
122047670 5273 Angiosperm View MSA
121344374 5274 Embryophyte View MSA
123380030 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.336        
cufflinks 0.342        
cufflinks 0.435       High
cufflinks 0.306        
cufflinks 0.278        
cufflinks 0.158       Low
cufflinks 0.373        
cufflinks 0.239        
cufflinks 0.373        

0 Strain