Gene : Medtr3g100480 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Description:  ubiquitin carboxy-terminal hydrolase
Genomic Order:  5487 Name:  ? Medtr3g100480
Secondary Identifier:  ? PAC:31055335
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g100480 0.5kb upstream 0.5kb upstream 7529 true chr3: 46210835-46218363 Medicago truncatula
Medtr3g100480 0.5kb upstream 0.5kb upstream 500 false chr3: 46217864-46218363 Medicago truncatula
Medtr3g100480 0.5kb downstream 0.5kb downstream 7529 true chr3: 46210335-46217863 Medicago truncatula
Medtr3g100480 0.5kb downstream 0.5kb downstream 500 false chr3: 46210335-46210834 Medicago truncatula
Medtr3g100480 1.0kb upstream 1.0kb upstream 8029 true chr3: 46210835-46218863 Medicago truncatula
Medtr3g100480 1.0kb upstream 1.0kb upstream 1000 false chr3: 46217864-46218863 Medicago truncatula
Medtr3g100480 1.0kb downstream 1.0kb downstream 8029 true chr3: 46209835-46217863 Medicago truncatula
Medtr3g100480 1.0kb downstream 1.0kb downstream 1000 false chr3: 46209835-46210834 Medicago truncatula
Medtr3g100480 2.0kb upstream 2.0kb upstream 9029 true chr3: 46210835-46219863 Medicago truncatula
Medtr3g100480 2.0kb upstream 2.0kb upstream 2000 false chr3: 46217864-46219863 Medicago truncatula
Medtr3g100480 2.0kb downstream 2.0kb downstream 9029 true chr3: 46208835-46217863 Medicago truncatula
Medtr3g100480 2.0kb downstream 2.0kb downstream 2000 false chr3: 46208835-46210834 Medicago truncatula
Medtr3g100480 5.0kb upstream 5.0kb upstream 12029 true chr3: 46210835-46222863 Medicago truncatula
Medtr3g100480 5.0kb upstream 5.0kb upstream 5000 false chr3: 46217864-46222863 Medicago truncatula
Medtr3g100480 5.0kb downstream 5.0kb downstream 12029 true chr3: 46205835-46217863 Medicago truncatula
Medtr3g100480 5.0kb downstream 5.0kb downstream 5000 false chr3: 46205835-46210834 Medicago truncatula
Medtr3g100480 10.0kb upstream 10.0kb upstream 17029 true chr3: 46210835-46227863 Medicago truncatula
Medtr3g100480 10.0kb upstream 10.0kb upstream 10000 false chr3: 46217864-46227863 Medicago truncatula
Medtr3g100480 10.0kb downstream 10.0kb downstream 17029 true chr3: 46200835-46217863 Medicago truncatula
Medtr3g100480 10.0kb downstream 10.0kb downstream 10000 false chr3: 46200835-46210834 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308034 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.313        
cufflinks 3.772        
cufflinks 4.188        
cufflinks 0.636       Low
cufflinks 4.363       High
cufflinks 0.74       Low
cufflinks 2.047        
cufflinks 3.58        
cufflinks 1.24        

0 Strain