Gene : Medtr3g100470 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31100:SF1 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17-RELATED Description:  AT hook motif DNA-binding family protein
Genomic Order:  5486 Name:  ? Medtr3g100470
Secondary Identifier:  ? PAC:31053781
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g100470 0.5kb upstream 0.5kb upstream 2093 true chr3: 46199993-46202085 Medicago truncatula
Medtr3g100470 0.5kb upstream 0.5kb upstream 500 false chr3: 46199993-46200492 Medicago truncatula
Medtr3g100470 0.5kb downstream 0.5kb downstream 2093 true chr3: 46200493-46202585 Medicago truncatula
Medtr3g100470 0.5kb downstream 0.5kb downstream 500 false chr3: 46202086-46202585 Medicago truncatula
Medtr3g100470 1.0kb upstream 1.0kb upstream 2593 true chr3: 46199493-46202085 Medicago truncatula
Medtr3g100470 1.0kb upstream 1.0kb upstream 1000 false chr3: 46199493-46200492 Medicago truncatula
Medtr3g100470 1.0kb downstream 1.0kb downstream 2593 true chr3: 46200493-46203085 Medicago truncatula
Medtr3g100470 1.0kb downstream 1.0kb downstream 1000 false chr3: 46202086-46203085 Medicago truncatula
Medtr3g100470 2.0kb upstream 2.0kb upstream 3593 true chr3: 46198493-46202085 Medicago truncatula
Medtr3g100470 2.0kb upstream 2.0kb upstream 2000 false chr3: 46198493-46200492 Medicago truncatula
Medtr3g100470 2.0kb downstream 2.0kb downstream 3593 true chr3: 46200493-46204085 Medicago truncatula
Medtr3g100470 2.0kb downstream 2.0kb downstream 2000 false chr3: 46202086-46204085 Medicago truncatula
Medtr3g100470 5.0kb upstream 5.0kb upstream 6593 true chr3: 46195493-46202085 Medicago truncatula
Medtr3g100470 5.0kb upstream 5.0kb upstream 5000 false chr3: 46195493-46200492 Medicago truncatula
Medtr3g100470 5.0kb downstream 5.0kb downstream 6593 true chr3: 46200493-46207085 Medicago truncatula
Medtr3g100470 5.0kb downstream 5.0kb downstream 5000 false chr3: 46202086-46207085 Medicago truncatula
Medtr3g100470 10.0kb upstream 10.0kb upstream 11593 true chr3: 46190493-46202085 Medicago truncatula
Medtr3g100470 10.0kb upstream 10.0kb upstream 10000 false chr3: 46190493-46200492 Medicago truncatula
Medtr3g100470 10.0kb downstream 10.0kb downstream 11593 true chr3: 46200493-46212085 Medicago truncatula
Medtr3g100470 10.0kb downstream 10.0kb downstream 10000 false chr3: 46202086-46212085 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304898 5265 Fabidae View MSA
124070322 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 118.06     High  
cufflinks 68.715     High  
cufflinks 64.239     High  
cufflinks 261.233     High High
cufflinks 34.529     High Low
cufflinks 111.78     High  
cufflinks 150.045     High  
cufflinks 98.139     High  
cufflinks 165.35     High  

0 Strain